DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRP6 and LpR1

DIOPT Version :10

Sequence 1:NP_001401173.1 Gene:LRP6 / 4040 HGNCID:6698 Length:1644 Species:Homo sapiens
Sequence 2:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster


Alignment Length:419 Identity:160/419 - (38%)
Similarity:226/419 - (53%) Gaps:40/419 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    23 LLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ 87
            ||.|.|.|:|.: |.:..| .|.:|...:.|.|:||||..|:|:||||:.::|.:...::.....
  Fly   599 LLLARRHDIRKI-ALDHME-MTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEGNEKT 661

Human    88 NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFM 152
            .|:....::.||||.||:...:|:||:....||::|.:||:.|||....||.||:|||||..|:|
  Fly   662 VVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWM 726

Human   153 YWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ 217
            ||:|||..|:|||||||||.|..||:.::.||||:|||..::::||.|.|||.|..:|.||:.|.
  Fly   727 YWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRS 791

Human   218 AVVKGS--LPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREI---HSDIFSPMDIHAFSQQ 277
            .|:...  |.|||::|.|||.:|||||...::...||:|||.:..:   |. :..||.:|.:...
  Fly   792 QVLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHM-LQHPMVVHVYHPY 855

Human   278 RQPNATNPCGIDNGGCSHLCLMSP----VKPFYQCACPTGVKLLENGKTCKDGATELLLL----- 333
            |||:..|.|...||.||||||.:|    ..|...||||||:||:.:|..|.:....|..:     
  Fly   856 RQPDGVNHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMVDGLMCVEDPLYLPPVTRPPR 920

Human   334 ARRTDLR----RISLDT---PDFTDIVLQLED----------IRHAIAIDYDPVEGYIYWTDDEV 381
            ||:|..|    |..|.|   ....||.:::.|          :......|..||:.:   |..|.
  Fly   921 ARKTKPRPKSPRRRLPTGVQVGHADIRIEINDDLQLSTRLPLLPTTFVADQRPVKNH---TQIEK 982

Human   382 RAIRRSFIDGSGSQFVVTAQIAHPDGIAV 410
            ........|   |.|:....||...|.||
  Fly   983 TTTPSEQPD---SGFIALVVIASLSGFAV 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRP6NP_001401173.1 YncE 1..204 CDD:442618 81/180 (45%)
Beta-propeller 1 20..275 111/256 (43%)
LY 89..127 CDD:214531 13/37 (35%)
Ldl_recept_b 150..191 CDD:459654 26/40 (65%)
LY 175..216 CDD:214531 19/40 (48%)
LY 217..251 CDD:214531 14/35 (40%)
LDL-receptor class B 5 237..276 14/41 (34%)
FXa_inhibition 286..323 CDD:464251 20/40 (50%)
Beta-propeller 2 328..589 24/105 (23%)
LY 353..393 CDD:214531 7/49 (14%)
LY 397..437 CDD:214531 5/14 (36%)
Ldl_recept_b 458..499 CDD:459654
LY 483..524 CDD:214531
LY 525..558 CDD:214531
FXa_inhibition 592..627 CDD:464251
Beta-propeller 3 631..890
YncE <654..813 CDD:442618
LY 697..739 CDD:214531
LY 827..866 CDD:214531
FXa_inhibition 893..929 CDD:464251
LY 958..998 CDD:214531
YncE <968..1075 CDD:442618
LY 1094..1132 CDD:214531
FXa_inhibition 1238..1274 CDD:464251
LDLa 1280..1316 CDD:238060
LDLa 1319..1353 CDD:238060
LDLa 1357..1391 CDD:238060
PPPSP motif A 1518..1524
PPPSP motif B 1558..1565
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1587..1644
PPPSP motif C 1599..1606
PPPSP motif D 1619..1624
PPPSP motif E 1634..1641
LpR1NP_001097934.2 LDLa 135..167 CDD:197566
LDLa 178..210 CDD:197566
LDLa 219..254 CDD:238060
LDLa 259..295 CDD:238060
LDLa 343..373 CDD:238060
LDLa 383..415 CDD:197566
Ldl_recept_a 423..459 CDD:395011
LDLa 476..504 CDD:197566
FXa_inhibition 514..549 CDD:464251
EGF_CA 551..581 CDD:214542
LY 662..702 CDD:214531 14/39 (36%)
LY 704..747 CDD:214531 29/42 (69%)
LY 749..790 CDD:214531 19/40 (48%)
Ldl_recept_b 769..815 CDD:459654 20/45 (44%)
FXa_inhibition 864..905 CDD:464251 20/40 (50%)
Blue background indicates that the domain is not in the aligned region.

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