DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfAP-2 and si:ch73-127m5.2

DIOPT Version :10

Sequence 1:NP_001262178.1 Gene:TfAP-2 / 40398 FlyBaseID:FBgn0261953 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001265527.1 Gene:si:ch73-127m5.2 / 561202 ZFINID:ZDB-GENE-030131-1052 Length:393 Species:Danio rerio


Alignment Length:404 Identity:85/404 - (21%)
Similarity:139/404 - (34%) Gaps:108/404 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PATGHSGHSSTHGSAATMHHQSLQSDFQPPYFPPPFHHSTQSPPQQQISGYLQNHGALEYLGTDP 114
            |:.|.  |.|.......:.|.|:.:.....|.|        .|..|.|:..:..|...:.:....
Zfish     3 PSAGM--HMSAVPQNTEVVHVSVANPIITMYQP--------QPQPQNIAQIITQHVLPQEVSCQA 57

  Fly   115 YGQPLSSLHHAPLHHYNQLAGLRSTQDQLGIH-RTHREAELQGHVTQLSHGFPYTDRRSDYGSAI 178
            ....:.|..|.|.|          .|.|..|. ..|.:...|.||...:|..|       .|..:
Zfish    58 VPHTMQSHVHMPTH----------IQTQSHIQPAPHLQTPPQVHVEAQTHIPP-------QGHML 105

  Fly   179 SAGAAHGTRLGHEHESLALHQALQNAVDDVQAPALDDNVAFMSDLPLIKSMKSGKEAGNIGSGSP 243
            :.|.:.|       :|.|..|.  .||:.:|.|..:  ||.:.|    .:|||.|          
Zfish   106 TQGPSEG-------QSAAPSQG--GAVNSLQVPFAE--VASLLD----PNMKSSK---------- 145

  Fly   244 SEVFCAVPGRLSLLSSTSKYKVTIAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKI 308
                            ..||::...||:|||.|||.::...|....|.::.....:.|.|.|...
Zfish   146 ----------------ARKYQIHYEEVKRRLEPPEKMSLRSLAAYTRVSRGPASKKTLLESLNVF 194

  Fly   309 GLNLPAGRRKAANVTLLTSLVEGEATHLAKD-----FHFVCETEFPARQLAEYI--VRHQTEPQD 366
            ||:.......:::.:.||   ||:...|.||     ..:| :.|..|:||....  |:|.::   
Zfish   195 GLSPSTNTAVSSSFSKLT---EGDTAALCKDMKDFALQYV-DYENMAKQLLPETNQVQHWSK--- 252

  Fly   367 SYRRKELILHSQQITKELMQILSQDRTTHFGTRSQHLLEPSMQRHLTHFSLITHGFGSPAIMAVL 431
                   |:.::...:|:.:|.:....|..                  ||.:|||.|:..:...|
Zfish   253 -------IIETRNYLEEMRKIFNDPLNTRL------------------FSNVTHGLGNGMMDVAL 292

  Fly   432 HAFQTFLNESLNYL 445
            ....:.::..:..|
Zfish   293 DIIDSVIDRQIRIL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfAP-2NP_001262178.1 TF_AP-2 247..441 CDD:460877 42/200 (21%)
si:ch73-127m5.2NP_001265527.1 PAT1 <5..>107 CDD:401645 25/128 (20%)
TF_AP-2 148..284 CDD:460877 40/167 (24%)

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