DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Neu2 and wor

Sequence 1:NP_649316.1 Gene:Neu2 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster

Alignment Length:411 Identity:93/412 (23%)
Similarity:145/412 (35%) Gaps:108/412 (26%)


  Fly    28 EKHDPL---SNTICKSCLE-----DAQNAFDIIETYERSHQFYRFLKDVREEESENDGSGCSEEV 84
            |:..||   :|.:.||..|     ..||..:.|........||.....:.|.|   |.|.....|
  Fly   154 EEQFPLRNYNNNLLKSIAEYEDCMKMQNIKEEIPPIPSPQLFYPPPTPLAEPE---DLSVTQRRV 215

  Fly    85 EAAERDLQDGAD-----------------DVDSGNE-PDINECDIKAKEKPGFSCSHCPKSFQVK 131
            .:...:||:.|.                 |::...| .|||:..||:.....:.|..|.|.:...
  Fly   216 LSENMNLQNVARALLSMQHMAPQHAPPPIDMEEDQENQDINQLKIKSSNDLYYQCQQCNKCYATY 280

  Fly   132 SNLKVHMRSHTGE--------------------------------------------RP-----F 147
            :.|..|.::|..|                                            :|     :
  Fly   281 AGLVKHQQTHAYESTEYKIIRSQPGGSGAIVDQTEFCTDQASALIQAANVASAQSMQKPVGVPRY 345

  Fly   148 TCSLCPKSFGYSSGLQNHMRTHTG-------ERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRC 205
            .|..|.||:...|||..|.:.|..       ::.|.|.:|.:::.:...||.||:.|..  ..:|
  Fly   346 HCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTHTL--PCKC 408

  Fly   206 PYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWMHMRVHQE-RLFTCGHCSKDFAL 269
            |.|.|.|....:|:.|:.|||.|..|.|..|:::|.....|..||:.|.: :.::|..|:|.|:.
  Fly   409 PICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSR 473

  Fly   270 HAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHL----KSHTKNKPLL 330
            .:.|.:||....:..||...|     |.....          |:..|..||    :.|..::...
  Fly   474 MSLLAKHLQSGCQTEQSGGPS-----GSGGGF----------DQQQLQQHLQVYEEGHNPHQLYY 523

  Fly   331 EGPCKSS-GSKPAHSNAQRKP 350
            .|...|| |.:......|.:|
  Fly   524 AGSVGSSNGEEEEGGEYQMQP 544

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 12/43 (28%)
COG5048 <119..241 CDD:227381 40/178 (22%)
C2H2 Zn finger 121..141 CDD:275368 5/20 (25%)
zf-H2C2_2 133..158 CDD:290200 9/74 (12%)
C2H2 Zn finger 149..169 CDD:275368 8/20 (40%)
zf-H2C2_2 162..185 CDD:290200 6/30 (20%)
C2H2 Zn finger 177..197 CDD:275368 6/20 (30%)
C2H2 Zn finger 205..225 CDD:275368 8/20 (40%)
zf-C2H2_8 206..286 CDD:292531 26/81 (32%)
C2H2 Zn finger 233..253 CDD:275368 6/20 (30%)
C2H2 Zn finger 260..297 CDD:275368 11/37 (30%)
C2H2 Zn finger 303..323 CDD:275368 4/24 (17%)
C2H2 Zn finger 353..373 CDD:275368
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 5/20 (25%)
C2H2 Zn finger 317..334 CDD:275368 0/17 (0%)
zf-C2H2 345..367 CDD:278523 8/22 (36%)
C2H2 Zn finger 347..367 CDD:275368 8/20 (40%)
PHA00732 379..>417 CDD:177300 13/40 (33%)
C2H2 Zn finger 382..402 CDD:275368 6/20 (30%)
zf-C2H2_8 405..482 CDD:292531 26/77 (34%)
zf-C2H2 406..428 CDD:278523 8/22 (36%)
C2H2 Zn finger 408..428 CDD:275368 8/20 (40%)
zf-H2C2_2 421..444 CDD:290200 10/23 (43%)
zf-C2H2 434..456 CDD:278523 7/22 (32%)
C2H2 Zn finger 436..456 CDD:275368 6/20 (30%)
zf-H2C2_2 448..473 CDD:290200 8/25 (32%)
C2H2 Zn finger 464..481 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR24409
RoundUp 00.000 Not matched by this tool.
11.100

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