DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and wor

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:411 Identity:93/411 - (22%)
Similarity:145/411 - (35%) Gaps:108/411 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EKHDPL---SNTICKSCLE-----DAQNAFDIIETYERSHQFYRFLKDVREEESENDGSGCSEEV 84
            |:..||   :|.:.||..|     ..||..:.|........||.....:.|.|   |.|.....|
  Fly   154 EEQFPLRNYNNNLLKSIAEYEDCMKMQNIKEEIPPIPSPQLFYPPPTPLAEPE---DLSVTQRRV 215

  Fly    85 EAAERDLQDGAD-----------------DVDSGNE-PDINECDIKAKEKPGFSCSHCPKSFQVK 131
            .:...:||:.|.                 |::...| .|||:..||:.....:.|..|.|.:...
  Fly   216 LSENMNLQNVARALLSMQHMAPQHAPPPIDMEEDQENQDINQLKIKSSNDLYYQCQQCNKCYATY 280

  Fly   132 SNLKVHMRSHTGE--------------------------------------------RP-----F 147
            :.|..|.::|..|                                            :|     :
  Fly   281 AGLVKHQQTHAYESTEYKIIRSQPGGSGAIVDQTEFCTDQASALIQAANVASAQSMQKPVGVPRY 345

  Fly   148 TCSLCPKSFGYSSGLQNHMRTHTG-------ERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRC 205
            .|..|.||:...|||..|.:.|..       ::.|.|.:|.:::.:...||.||:.|..  ..:|
  Fly   346 HCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTHTL--PCKC 408

  Fly   206 PYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWMHMRVHQE-RLFTCGHCSKDFAL 269
            |.|.|.|....:|:.|:.|||.|..|.|..|:::|.....|..||:.|.: :.::|..|:|.|:.
  Fly   409 PICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSR 473

  Fly   270 HAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHL----KSHTKNKPLL 330
            .:.|.:||....:..||...|     |.....          |:..|..||    :.|..::...
  Fly   474 MSLLAKHLQSGCQTEQSGGPS-----GSGGGF----------DQQQLQQHLQVYEEGHNPHQLYY 523

  Fly   331 EGPCKSS-GSKPAHSNAQRKP 350
            .|...|| |.:......|.:|
  Fly   524 AGSVGSSNGEEEEGGEYQMQP 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 11/42 (26%)
COG5048 <119..241 CDD:227381 39/177 (22%)
C2H2 Zn finger 121..141 CDD:275368 5/19 (26%)
zf-H2C2_2 133..156 CDD:463886 8/71 (11%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:463886 6/29 (21%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 7/19 (37%)
zf-C2H2_8 206..286 CDD:464935 25/80 (31%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
C2H2 Zn finger 260..297 CDD:275368 10/36 (28%)
C2H2 Zn finger 303..323 CDD:275368 4/23 (17%)
C2H2 Zn finger 353..373 CDD:275368
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 5/19 (26%)
C2H2 Zn finger 317..334 CDD:275368 0/16 (0%)
zf-C2H2 345..367 CDD:395048 8/21 (38%)
C2H2 Zn finger 347..367 CDD:275368 8/19 (42%)
zf-C2H2 380..402 CDD:395048 7/21 (33%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
zf-C2H2 406..428 CDD:395048 7/21 (33%)
C2H2 Zn finger 408..428 CDD:275368 7/19 (37%)
zf-C2H2 434..456 CDD:395048 7/21 (33%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
C2H2 Zn finger 464..481 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.

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