DRSC/TRiP Functional Genomics Resources

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Protein Alignment sa and taf8

DIOPT Version :10

Sequence 1:NP_649311.1 Gene:sa / 40367 FlyBaseID:FBgn0002842 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_012818203.1 Gene:taf8 / 549471 XenbaseID:XB-GENE-491356 Length:293 Species:Xenopus tropicalis


Alignment Length:271 Identity:71/271 - (26%)
Similarity:110/271 - (40%) Gaps:36/271 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LATVLDNLLASKNCEVVDDVLRQSMLELLRGKFREIARQTTNWSNHAGRCAPSYFDLERTFIRMN 72
            |..|:.:||.....|..:....:|:.|:|:....||.|...::..|..|..|:..|:..|.|.|.
 Frog    27 LQVVVSSLLTEAGFESAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDIVVTLIEMG 91

  Fly    73 IKVGELKAMYEGQPDSLVLVECNAPETQDQDFHSVPQPVLSSTKAVELAST----TYIPDHLPPF 133
            ..|..|.| |..:...:|:   .||...:       .||:  .||:.....    .:||.|.|.|
 Frog    92 FNVESLPA-YAKRSQ
RMVI---TAPPVTN-------NPVV--PKALSAGQNKQHPAHIPSHFPEF 143

  Fly   134 PGAHTY-KSSTI-EKVTDRSYVAMRNRHAENELNTQNALNQYYLRCNPNISLFEETQRDGSGHVL 196
            |..||| |:.|. |.|.|  |..:|.:.|....:.:.||.::..:.....|||::   |.|...|
 Frog   144 PDPHTYIKTPTYREPVCD--YQVLREKAASQRRDVERALTRFMAKTGETQSLFKD---DTSTFPL 203

  Fly   197 DLGPPKKLPYSDALMPR----NQVFDTDIYAPIEVITHKALDCRYLEKPKLHSSRPSSGNFEEED 257
            ....|..:||.:||:|.    .||.:||        :.:..|....|...:|......|..:|..
 Frog   204 IAARPLSIPYLNALLPSELELQQVEETD--------SSEQDDQTDAENLSMHLQGDEVGMEKENS 260

  Fly   258 VEMEEPCSPGG 268
            ..:::....||
 Frog   261 SVLQQNSMKGG 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saNP_649311.1 Bromo_TP 6..77 CDD:400073 19/68 (28%)
TAF8 125..177 CDD:176263 19/53 (36%)
taf8XP_012818203.1 HFD_TAF8 22..105 CDD:467043 22/78 (28%)
TAF8 134..187 CDD:176263 19/54 (35%)

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