DRSC/TRiP Functional Genomics Resources

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Protein Alignment sa and taf3

DIOPT Version :10

Sequence 1:NP_649311.1 Gene:sa / 40367 FlyBaseID:FBgn0002842 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001036209.2 Gene:taf3 / 334474 ZFINID:ZDB-GENE-030131-6406 Length:898 Species:Danio rerio


Alignment Length:268 Identity:50/268 - (18%)
Similarity:90/268 - (33%) Gaps:99/268 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 CEVVDDVLRQSMLELLRGKFREIARQTTNWSNHAGRCAPSYFDLERTFIRMNIKVGELKAMYEGQ 85
            |:::.|||.:.:        :::|:....:|...||..|...|:::.|..:.:.:.||:      
Zfish    31 CDLLSDVLERYV--------QQLAKSCHRYSELYGRTDPGLSDVDQAFGFLGVSIAELE------ 81

  Fly    86 PDSLVLVE-CNAPETQDQDFHSVPQPVLSSTKAVELAST---------------TYIPDHLPPFP 134
             |.:..|| ...|:|       :||..:|.:..::..:.               .|||::.||..
Zfish    82 -DYVNNVEPIGYPQT-------IPQFPISKSSVLQFPAAGFDTDARDALRGERRDYIPEYFPPLV 138

  Fly   135 GAHTYKSSTIEKVTD--RSYVAMR-----NRHAENELNTQNALNQYYLRCNPNISLFEETQRDGS 192
            .....:........|  .|..||:     ....|.|.|.:|.|:::                ||.
Zfish   139 SLQEDEEEEEPVPADMGTSAEAMQVSMGEEEDGEEEENDENWLSRH----------------DGQ 187

  Fly   193 GHVLDLGPPKKLPYSDALMPRNQVFDTDIYAPIEVITHKALDCRYLEKPKLHSSRPSSGNFEEED 257
            .           |..:.|:|.                        .::|:| |::|  |...|..
Zfish   188 S-----------PRPEGLLPA------------------------AKRPRL-STKP--GVSPEWS 214

  Fly   258 VEMEEPCS 265
            .|..||.|
Zfish   215 YEPREPLS 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saNP_649311.1 Bromo_TP 6..77 CDD:400073 11/55 (20%)
TAF8 125..177 CDD:176263 14/58 (24%)
taf3NP_001036209.2 None

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