Protein Alignment: Pc and Cbx6

• Sequence 1: NP_524199.1
• Gene: Pc
• FlyBaseID: FBgn0003042
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: XP_006242056.1
• Gene: Cbx6
• RGDID: 1307314
• Length: 414
• Species: Rattus norvegicus
• Alignment Length: 433
• Identity: 104/434 (24%)
• Similarity: 152/434 (35%)
• Gaps: 135/434 (31%)

  Fly    25 VYAAEKIIQKRVKKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYEQTNKSSGT--PSKRGI 87
            |:|||.||::|::||.:||.||||||..:|:|||||.||||.|||..:||..:....  |.|||.
  Rat    10 VFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERERELYGPKKRGP 74

  Fly    88 KKKEKEPDPEPESEEDEYTFTENDVDTHQATTSSATHDKESKKEKKHHHHHHHHHHIKSERNSGR 152
            |.|........::|....:      |.|.:...||     |....|.|.....|...|..|...|
  Rat    75 KPKTFLLKARAQAEALRIS------DVHFSVKPSA-----SASSPKLHSSAAVHRLKKDIRRCHR 128

  Fly   153 RSESPLTHHHHHHHHESKRQRIDHSSSSNSSFTHNSFVPEPDSN----------SSSSEDQPLIG 207
            .|..||                                |.||..          |..||...:|.
  Rat   129 MSRRPL--------------------------------PRPDPQGGNPGLRPPISPFSETVRIIN 161

  Fly   208 TKRKAEVLKESGKIGVTIKTSPDGP-----------TIKPQ-PTQQVTPSQQQPFQDQQQAEKI- 259
            .|.|....|.: :|.:.:|....||           ..:|: |::.....:.:.|.:.....:|
  Rat   162 RKVKPREPKRN-RIILNLKVIDKGPGGGSTAQGTGALARPKVPSRNRVIGKSKKFSESMLRTQIR 225

  Fly   260 -----------------------ASEAATQLKSEQQATPLATEAINTTPAESGAEEEEVANEEGN 301
                                   .::.|:.......|||.|......:.:.||.....:.:.:.:
  Rat   226 HMKFGTFALYKPPPAPLVPSTAGKADVASSGPGLLLATPAAAPFDAHSSSSSGCPSPTLQSSDPD 290

  Fly   302 QQAPQVPSENNNIPKPCNNLAINQKQ---------PLTPLSPRALPPRF---------------- 341
            ...|::      :|:..:..|.|.::         |....:.:.:||..
  Rat   291 DAPPKL------LPETISRSASNWRESEVLDLSIPPEAAATGQRVPPDVTAAAGQALHTVLEATG 349

  Fly   342 ----------WLPAKCNISNRVVITDVTVNLETVTIRE-CKTE 373
                      |.|.....|| ||:||||.||.||||:| |..|
  Rat   350 TGSSEPEAGDWRPEMSPCSN-VVVTDVTSNLLTVTIKEFCSPE 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pc	NP_524199.1	CHROMO	25..77	CDD:214605	32/52 (62%)
Cbx6	XP_006242056.1	CHROMO	10..62	CDD:214605	32/52 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_KOG2748
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010				D1628171at2759
OrthoFinder	1	1.000				FOG0001702
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910