DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AcCoAS and ACS

DIOPT Version :10

Sequence 1:NP_730611.1 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001031974.2 Gene:ACS / 833655 AraportID:AT5G36880 Length:743 Species:Arabidopsis thaliana


Alignment Length:661 Identity:362/661 - (54%)
Similarity:463/661 - (70%) Gaps:10/661 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EKSIYDPNPAISQNAYISSFEEYQKFYQESLDNPAEFWSRVAKQFHWETPADQDKFLKYNFNISK 68
            |..:..|:...|..|.:||.::|.:.::.|:|:||.|||.:|.:|:|:.... |:....|.::.|
plant    88 ENDLVFPSKEFSGQALVSSPQQYMEMHKRSMDDPAAFWSDIASEFYWKQKWG-DQVFSENLDVRK 151

  Fly    69 GPISIKWMEGASTNLCYNLLDRNVRNGLGDQIAYYWEGNHPDDYSRGLTYRKLLEEVCRFANVLK 133
            |||||:|.:|..||:|||.||:||..||||:.|.:||||.. .....|||.:||:.||:.||.||
plant   152 GPISIEWFKGGITNICYNCLDKNVEAGLGDKTAIHWEGNEL-GVDASLTYSELLQRVCQLANYLK 215

  Fly   134 DHGIRKGDRVSIYMPMILELPIAMLACARIGAVHSIVFAGFSPDSLAERMFDCKAKLLITADGAW 198
            |:|::|||.|.||:||::|||||||||||||||||:||||||.||||:|:.|||..:::|.:...
plant   216 DNGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSADSLAQRIVDCKPNVILTCNAVK 280

  Fly   199 RGEKPLYLKALCDTALEKVEEMGHSVEKCIVVSHLKRVTPCQPDHVEEEIPWTDDRDYWWHEEME 263
            ||.|.:.|||:.|.||::..:.|.||..|:...:....|       .|...|.:.||.||.:.:.
plant   281 RGPKTINLKAIVDAALDQSSKDGVSVGICLTYDNSLATT-------RENTKWQNGRDVWWQDVIS 338

  Fly   264 DKEPACYPEWMDAEDPLFMLYTSGSTGKPKGVLHTTAGYLLYAATTFKIVFDYKPGDIYWCTGDV 328
            ....:|..||:|||||||:|||||||||||||||||.||::|.|||||..||||..|:||||.|.
plant   339 QYPTSCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMIYTATTFKYAFDYKSTDVYWCTADC 403

  Fly   329 GWITGHTYVVYGPLANGATSVIFEGTPFFPGNDRYWSVIDKYKVTQFYTAPTAIRALMKFGEGPV 393
            ||||||:||.|||:.||||.|:|||.|.:|...|.|.::|||||:.||||||.:|:||:..:..|
plant   404 GWITGHSYVTYGPMLNGATVVVFEGAPNYPDPGRCWDIVDKYKVSIFYTAPTLVRSLMRDDDKFV 468

  Fly   394 LKHNLSGLKVLGSVGEPINPEAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPLPGATPMKPGSA 458
            .:|:...|:|||||||||||.||.|::..:|..:|.|.||:|||||||.:|||||||.|.|||||
plant   469 TRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSA 533

  Fly   459 SFPFFGVKPTLLDECGIEIKGEGEGYLVFSQPWPGMMRTLYNNHERFEDTYFSKFPGYYCTGDGA 523
            :||||||:|.::||.|.||:||..|||.....|||..|||:.:|||:|.|||..|.|||.:|||.
plant   534 TFPFFGVQPVIVDEKGNEIEGECSGYLCVKGSWPGAFRTLFGDHERYETTYFKPFAGYYFSGDGC 598

  Fly   524 RRDADGYLWITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGECLYCFITPNE 588
            .||.|||.|:||||||::|||||.:.||||||.|..||:.||:|||...|.|||:.:|.|:|..|
plant   599 SRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVLHPQCAEAAVVGIEHEVKGQGIYAFVTLLE 663

  Fly   589 NEVFDQKLISDLKKMVRERIGPFAMPDVIQNAPGLPKTRSGKIMRRVLRKIAVND-RNVGDTSTL 652
            ...:.::|...|..|||.:||.||.||.|..|||||||||||||||:|||||... ..:||||||
plant   664 GVPYSEELRKSLVLMVRNQIGAFAAPDRIHWAPGLPKTRSGKIMRRILRKIASRQLEELGDTSTL 728

  Fly   653 ADEQIVEQLFA 663
            ||..:|:||.|
plant   729 ADPSVVDQLIA 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_730611.1 ACS 24..654 CDD:341270 350/630 (56%)
ACSNP_001031974.2 PLN02654 79..743 CDD:215353 362/661 (55%)

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