DRSC/TRiP Functional Genomics Resources

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Protein Alignment AcCoAS and Acsm3

DIOPT Version :10

Sequence 1:NP_730611.1 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_006230168.1 Gene:Acsm3 / 24763 RGDID:62086 Length:581 Species:Rattus norvegicus


Alignment Length:648 Identity:182/648 - (28%)
Similarity:279/648 - (43%) Gaps:101/648 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SIYDPNPAISQNAYISSFEEYQKFYQESLDNPAEFWSRVAKQFHWETPADQDKFLKYNFNISKGP 70
            :|.||...:        :::|:....::..|    :..:...|..|.|       :| ||.:|..
  Rat    14 AIPDPRRIL--------YKDYRTAIPQNFSN----YESMKHDFKIEIP-------EY-FNFAKDV 58

  Fly    71 ISIKWMEGASTNLCYNLLDRNVRNGLGDQIAYYW-EGNHPDDYSRGLTYRKLLEEV----CRFAN 130
            :. :|.....|.       :.:.|.     |::| :||       |...|...||:    .:|||
  Rat    59 LD-QWTNTEKTG-------KRLSNP-----AFWWVDGN-------GKEVRWSFEELGSLSRKFAN 103

  Fly   131 VLKDH-GIRKGDRVSIYMPMILELPIAMLACARIGAVHSIVFAGFSPDSLAERMFDCKAKLLITA 194
            :|.:. .:::||||.:.:|.|.|..:|.:||.|.|.|........:...:..|:...|:|.:||.
  Rat   104 ILTEACSLQRGDRVMVILPKIPEWWLANVACLRTGTVLIPGTTQLTQKDILYRLQSSKSKCIITD 168

  Fly   195 DGAWRGEKPLYLKALCDTALEKVEEMGHSVEKCIVVSHLKRVTPCQPDHVEEEIPWTDDRDYWWH 259
            |         .|....|....|.|.: ||  |.||..|.:...    .:::|.:.:..|.    |
  Rat   169 D---------TLAPAVDIVAAKCENL-HS--KLIVSQHSREGW----GNLKEMMKYASDS----H 213

  Fly   260 EEMEDKEPACYPEWMDAEDPLFMLYTSGSTGKPKGVLHTTAGYLLYAATTFKIVFDYKPGDIYWC 324
            ..::.|.          .:.:.:.:|||:||.||.:.||.:.:.|..:...:...|....|:.|.
  Rat   214 TCVDTKH----------NELMAIYFTSGTTGPPKMIGHTHSSFGLGLSVNGRFWLDLIASDVMWN 268

  Fly   325 TGDVGWITGHTYVVYGPLANGATSVIFEGTPFFPGNDRYWSVIDKYKVTQFYTAPTAIRALMKFG 389
            |.|.||.......|:.|...|| .|.....|.|.... ....:.|:.:|.|.:||||.|.|::  
  Rat   269 TSDTGWAKSAWSSVFSPWTQGA-CVFAHYLPRFDSTS-ILQTLSKFPITVFCSAPTAYRMLIQ-- 329

  Fly   390 EGPVLKHNLSGLKVLGSVGEPINPEAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPLPGATPMK 454
            ......:..:.||...|.|||||||....:.|..|.:   |.:.:.||||  .:|........:|
  Rat   330 NDITRSYKFNSLKHCVSAGEPINPEVMEQWKKKTGLD---IYEGYGQTET--VLICGNFKGMKIK 389

  Fly   455 PGSASFPFFGVKPTLLDECGIEIKGEGEGYLVF----SQPWPGMMRTLYNNHERFEDTYFSKFPG 515
            |||...|.......:|||.|..:....||.:..    .:|: |:.....:|..:...|....|  
  Rat   390 PGSMGKPSPAFNVEILDENGTILPPGQEGDIAVQVLPDRPF-GLFTHYVDNPSKTASTLRGNF-- 451

  Fly   516 YYCTGDGARRDADGYLWITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGECL 580
             |.|||....|.|||.|...|.||::..||:.:...||||.|.|||.:|||||||.|.|::||.:
  Rat   452 -YITGDRGYMDEDGYFWFVARSDDVILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVV 515

  Fly   581 YCFITPN-ENEVFDQKLISDLKKMVRERI----GPFAMPDVIQNAPGLPKTRSGKIMRRVLRK 638
            ..||..| :.::.||:   .|||.::|.:    .|:..|..|:....||||.|||:.|..||:
  Rat   516 KAFIVLNPDYKLHDQE---QLKKEIQEHVKKTTAPYKYPRKIEFIEELPKTVSGKVKRNELRR 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_730611.1 ACS 24..654 CDD:341270 179/630 (28%)
Acsm3XP_006230168.1 MACS_euk 48..578 CDD:341251 175/602 (29%)

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