DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10508 and Wwc3

DIOPT Version :10

Sequence 1:NP_001246859.1 Gene:CG10508 / 40342 FlyBaseID:FBgn0037060 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001414540.1 Gene:Wwc3 / 317439 RGDID:1560666 Length:1214 Species:Rattus norvegicus


Alignment Length:795 Identity:144/795 - (18%)
Similarity:253/795 - (31%) Gaps:254/795 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KMPPGWDCKYDQATGNCYYINYLTKAMQLEDPRGRSYRQLQNERCSTESIALQQLVSQPQTSHNS 73
            ::|.||:..||:..| .||::::.|..|:||||.:..|  :.||...|.:    :|:|...:...
  Rat   107 ELPLGWETVYDKQIG-IYYMDHINKLTQIEDPREQWRR--EQERMLKEYL----IVAQEALNAKK 164

  Fly    74 SPYHVHPSNNLTAIRAFQERQQPTLHNI-------------------------------STSPLL 107
            ..|.:.......|...:|:     ||.:                               |....|
  Rat   165 EIYQIKQQRFELAQEEYQQ-----LHKLCEDDGRSYTSSFSGYSTNTKYDPHQIKAEIASRRDRL 224

  Fly   108 SASSRGHLEMSSPLPFQRARVGPNLSRRSTIQE------TSFTTQA--ETDAVVTKIQNMFPT-- 162
            |...|...:|...|.::...|       .|:||      .:.||..  |..|::::::.:...  
  Rat   225 SRLKRELAQMKQELQYKEKGV-------ETLQEIDRKMSNTHTTYKLDEAQAIMSELRTIKKAIC 282

  Fly   163 AGENHIRLLLKRY------YNSEAVVVSALQVEKHPVTMPGPFVTPPSQRHLFHSGSAFYMTPPA 221
            .||...|.|::..      :.:...:|..|....|            |...|.:||::.......
  Rat   283 TGEKERRDLMQSLAKLTDSFKNSCSIVDTLPDFSH------------STGSLGNSGASQQFCDAG 335

  Fly   222 RRPDTV-----------------------ASRRTSRTASPLPGGRFGSLVSVQSGPGGPSGHQAV 263
            .:.|||                       |.:|.|.....|      :.::.:|.||        
  Rat   336 SQTDTVGEFLFDDKTRLVDRVRLNWQYEEARKRVSNIQQQL------AQLANESWPG-------- 386

  Fly   264 LPPSSAVPPALHGSPLWRSSPRPHSSPKMKLRYMKNIFPKADEELLLDILANAD-NNVQFASEKL 327
                                                             :|.|| :.:|...||.
  Rat   387 -------------------------------------------------MAEADRDRLQLIKEKE 402

  Fly   328 ISLGYTKRDMQQPHRPNNRPPDLNQDQEAGGDQSGVHIPLRPKEYTEEEKTKMQTLLKEKYPQIA 392
            ..|...:..:|| .|.......|.:::....|:      ::....|..:....:.||:||     
  Rat   403 ALLQELQLIIQQ-RRSAEDVVRLEEERRRLEDE------IQRARATSAQGATERILLQEK----- 455

  Fly   393 ERIILMALESVNYAEDRATQILQIVQDEDEQREQKQAPMNPKHLDLKK-TTGTEQIDGANEKDSL 456
            ...:||.||       .||::...:|.:                 ||. :..|..:...:.:.||
  Rat   456 RNCLLMQLE-------EATRLTSYLQSQ-----------------LKSLSASTLTVSSGSSRGSL 496

  Fly   457 PAVVEPTTSSKPKPPHKRHILPSINVTTPSTFTTQIILAQATPTPTPTAEEMKLETHLSSISSAS 521
                   .||:......|..|.||      :||....|.|.........:.::.:  |....|..
  Rat   497 -------ASSRGSLASSRGSLSSI------SFTDIYGLPQYEKADAECGQLLRFD--LIPFESLG 546

  Fly   522 SSHSYASPPQSPRIFQQSYERLTTKSILAKSGHNHFGHQSDTNNYSIDGYLHGSSNASSYSSYSA 586
            ....: :.|||...|.:..:.|.|...||.                    |...|:.||.|..|:
  Rat   547 RDVPF-TDPQSHSGFHKQRKSLDTPQSLAS--------------------LSSRSSLSSLSPPSS 590

  Fly   587 SMTSSSLVSSAQSNSSSIARRPAFESRARTKTDSLKHRQHSLGNSHNSESAEFQSIIERMASLGP 651
            .:.:..|.:|..|..:.:.  ..:|:......|.|:.:..:||:.....||..|.....:...||
  Rat   591 PLDTPFLTASRDSPLAQMT--DTYEAAGLGTLDRLRSQASTLGDEDLQGSAILQPHGIPVDGEGP 653

  Fly   652 NSQLSKGADENLLLADYVTWNGPNTKLLQKQITQG----PNASLLTDR-TYKPRGGKSELCKGPQ 711
            .   .:|.......:..||....:.|.|:::..:.    .:.||.:|. .::|...::|..:.| 
  Rat   654 R---ERGPQPVAPTSATVTLREDSAKRLERRARRVSACLSDYSLASDSGVFEPLTKRNEDAEEP- 714

  Fly   712 SGLAKGSIYAQGSNK 726
               |.|.:|  |:|:
  Rat   715 ---AFGDMY--GNNE 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10508NP_001246859.1 CUE 291..327 CDD:270465 5/36 (14%)
Wwc3NP_001414540.1 None

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