DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32432 and Lrp1b

DIOPT Version :10

Sequence 1:NP_649266.1 Gene:CG32432 / 40310 FlyBaseID:FBgn0052432 Length:1307 Species:Drosophila melanogaster
Sequence 2:XP_006498522.1 Gene:Lrp1b / 94217 MGIID:2151136 Length:4668 Species:Mus musculus


Alignment Length:1136 Identity:203/1136 - (17%)
Similarity:330/1136 - (29%) Gaps:420/1136 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 PSSSSSISSSLGPGKPVNLQLAPGSSSTGCSLAEFSCSNGRCVPLSKYCNNLNDCGDGSDE---- 245
            |.||..        .|:|.:..  |:...|:.:.|.|.||||:|....|:..:||||||||    
Mouse  2903 PDSSDE--------APINPRCR--SAEHSCNSSFFMCKNGRCIPSDGLCDIRDDCGDGSDETNCH 2957

  Fly   246 ----------------------------PRF------------------------CTRCNRTYYG 258
                                        |.|                        |.....||..
Mouse  2958 INECLSKKISGCSQDCQDLPVSYKCKCWPGFQLKDDGKTCVDIDECSSGFPCSQQCINTYGTYKC 3022

  Fly   259 DIGQTYALELHRPK-----QDRVPFVCVLTFTAAGGQHGDVVQVTLD--SFTI------------ 304
            ...:.|..:...|.     .|..||:.:      ..|| ::.:::.|  ::|:            
Mouse  3023 HCAEGYETQPDNPNGCRSLSDEEPFLIL------ADQH-EIRKISTDGSNYTLLKQGLNNVIALD 3080

  Fly   305 ----GRFTSYVHEGCPDGY-----------MQIAESARTP--IGGMWCGSSWGPVLFYSETRSLI 352
                ..|..::....|:|.           :::..:...|  :...|.|.:    |::|:|...|
Mouse  3081 FDYREEFIYWIDSSRPNGSRINRMCLNGSDIKVVHNTAVPNALAVDWIGKN----LYWSDTEKRI 3141

  Fly   353 FTI-RLNRLARDQSGYNFDFRIRYKVLSRDSSV-TRYGGIKLAELAQWHNRSSFLNQQQQQQQQQ 415
            ..: :||.|      |......:.....||.|: .|.|.:...:..::                 
Mouse  3142 IEVSKLNGL------YPTVLVSKRLKFPRDLSLDPRAGNLYWIDCCEY----------------- 3183

  Fly   416 QQQQQQQQGAPGILEDFTNSSVARSDRYGQDFSLFSAYANNKTFMAS---LEKSLAKDEQNYTEP 477
                 ...|..|:  |.||.||....:..:..:|...|.|::.:.|.   :|.|.......:..|
Mouse  3184 -----PHIGRVGM--DGTNQSVVIETKISRPMALTIDYVNHRLYWADENHIEFSNMDGSHRHKVP 3241

  Fly   478 KYYLGDLIPGTYCSRIFSD----CDKKPCRLQSPNFPGIYPR-----------NLTCYYAVRQHD 527
                ...|||.....:|.|    .|.|...|...:......|           ::..|::.||.|
Mouse  3242 ----NQDIPGVIALTLFEDYIYWTDGKTKSLSRVHKTSGADRLSLINSWHAITDIQVYHSYRQPD 3302

  Fly   528 VPHGKHALILVKQPKGNLVWISTQET-----------AAANKMA-PPPSASDKDKKFEPRLKTWN 580
            |  .||...:......:|..:...:|           ||.|:.. ...:||....|.:..:..|.
Mouse  3303 V--SKHLCTVNNGGCSHLCLLGPGKTHTCACPTNFYLAADNRTCLSNCTASQFRCKTDKCIPFWW 3365

  Fly   581 YCDYIQENVKPKWKSTDYVTVYDGYTTRDPIILKFCGGGQAVPAAVSSGPELLVEFSTSPFGTF- 644
            .||.:.:                            ||.|       |..|:...||...| |.| 
Mouse  3366 KCDTVDD----------------------------CGDG-------SDEPDDCPEFKCQP-GRFQ 3394

  Fly   645 TGTSSQVLPLY-----------GFQLEVEVQFVDIQSPTYSKNKKPCEFWIRGAGRGIL------ 692
            .||....||.:           ..:|..:...........:||||.....:|..|:...      
Mouse  3395 CGTGLCALPAFICDGENDCGDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLRCNGQDDCGDEEDE 3459

  Fly   693 -ESPKHSLAPN----STCLYHLQGLGV-------FKTFDHLSLSRRTSSQSGMHQPLSRFKVWIS 745
             :.|::|.:|:    .|..:.:..|.|       ....|..:..::|   .|.|:        ..
Mouse  3460 KDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKT---CGPHE--------FQ 3513

  Fly   746 VLKFNLDPEFGQIDETSVGAIGVLQTQEDCSG-------------------------MLRIW-DG 784
            ....|..|:..:.|           .|.|||.                         ..|.| ||
Mouse  3514 CKNNNCIPDHWRCD-----------NQNDCSDNSDEDNCKPQTCTLKDFLCSNGDCVSSRFWCDG 3567

  Fly   785 TLRDAPVCKDLNCATETSSYNTLGHYTHNSTSVIARF-CRGTIPRTC----DRSNINETYARPCT 844
            ....|....:.||.|..|...   ....|...:.|:: |.|  ...|    |..|....:. .|:
Mouse  3568 EFDCADGSDEKNCETSCSKDQ---FQCSNGQCLSAKWKCDG--HEDCKYGEDEKNCEPAFP-VCS 3626

  Fly   845 ISESYVSTSDAITLELR-NTESTVLRPLD------------FKLK---------------YEFID 881
            .||...::...::..|: |.|...:...|            |:.|               |:.:|
Mouse  3627 SSEYMCASGGCLSASLKCNGEPDCVDGSDEMDCVIECKEDQFQCKNKAYCIPIRWLCDGIYDCVD 3691

  Fly   882 LHQDGLPWGGGEHDCNR--------KFLSSMM----------------DRKDPAIFRSVRNIFLF 922
                    |..|..|.|        :||.:..                |..|.|....|:    |
Mouse  3692 --------GSDEETCGRGGSICRDDEFLCNNSLCKLHFWVCDGEDDCGDNSDEAPDMCVK----F 3744

  Fly   923 GRGGTRNLKCIYKFEAQRGERVRIKMRKVTTTNRPCYSRVDEDINRSFCYGDTNVRIEIFERPYH 987
            ....||..:|       |.:|:.:::.|:......|....||:    .|.|    ::.:..:|  
Mouse  3745 LCPPTRPYRC-------RNDRICLQLEKICNGINDCGDNSDEE----HCSG----KLSLKSKP-- 3792

  Fly   988 DSILLHRGCMCNS-----SNQSHLPVEYTSTSRDVEVHFIAQNMTTLDDPDTVNFEGMFEFVKAP 1047
                      |..     ||::.:|:|....|.|             |..|..:.:|.   :|.|
Mouse  3793 ----------CKKDEFTCSNRNCIPMELQCDSLD-------------DCGDGSDEQGC---LKTP 3831

  Fly  1048 T--SCKDGRRKFGPSGTIDMTFGDVECRSRP 1076
            .  :|::.....|.....:.....|.||.:|
Mouse  3832 IEHTCENNGNPCGDDAYCNQIKTSVFCRCKP 3862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32432NP_649266.1 LDLa 214..245 CDD:197566 15/30 (50%)
CUB 503..646 CDD:238001 30/166 (18%)
LDLa 1203..1231 CDD:197566
Lrp1bXP_006498522.1 LDLa 63..95 CDD:238060
LDLa 107..140 CDD:197566
FXa_inhibition 194..224 CDD:464251
LY 314..346 CDD:214531
LY 350..392 CDD:214531
LY 394..435 CDD:214531
FXa_inhibition 506..547 CDD:464251
Ldl_recept_b 599..639 CDD:459654
LY 622..661 CDD:214531
LY 668..717 CDD:214531
LY 718..760 CDD:214531
FXa_inhibition 829..864 CDD:464251
LDLa 917..950 CDD:238060
LDLa 957..989 CDD:197566
LDLa 1000..1033 CDD:238060
LDLa 1037..1070 CDD:238060
LDLa 1084..1119 CDD:238060
Ldl_recept_a 1131..1162 CDD:395011
LDLa 1167..1202 CDD:238060
FXa_inhibition 1207..1243 CDD:464251
YncE 1313..1537 CDD:442618
LY 1358..1398 CDD:214531
LY 1402..1445 CDD:214531
Ldl_recept_b 1649..1689 CDD:459654
LY 1672..1714 CDD:214531
Ldl_recept_b 1736..1773 CDD:459654
LY <1766..1797 CDD:214531
FXa_inhibition 1869..1905 CDD:464251
NHL 1944..2169 CDD:302697
NHL repeat 1944..1983 CDD:271320
LY 1978..2018 CDD:214531
NHL repeat 1988..2025 CDD:271320
NHL repeat 2029..2070 CDD:271320
Ldl_recept_b 2039..2080 CDD:459654
LY 2064..2106 CDD:214531
NHL repeat 2073..2111 CDD:271320
NHL repeat 2120..2159 CDD:271320
FXa_inhibition 2178..2213 CDD:464251
Ldl_recept_b 2361..2403 CDD:459654
LY 2386..2428 CDD:214531
LDLa 2545..2574 CDD:238060
LDLa 2583..2617 CDD:238060
LDLa 2622..2656 CDD:238060
LDLa 2676..2705 CDD:238060
LDLa 2713..2747 CDD:238060
LDLa 2751..2784 CDD:238060
LDLa 2791..2824 CDD:197566
LDLa 2875..2908 CDD:197566 3/4 (75%)
LDLa 2922..2956 CDD:238060 17/33 (52%)
FXa_inhibition 2968..2997 CDD:464251 2/28 (7%)
EGF_CA 2999..3033 CDD:214542 4/33 (12%)
LY 3066..3110 CDD:214531 4/43 (9%)
LY 3111..3149 CDD:214531 8/41 (20%)
LY 3154..3195 CDD:214531 8/64 (13%)
LY 3198..3237 CDD:214531 7/38 (18%)
FXa_inhibition 3308..3344 CDD:464251 5/35 (14%)
LDLa 3348..3379 CDD:197566 10/65 (15%)
LDLa 3388..3422 CDD:238060 8/34 (24%)
LDLa 3427..3462 CDD:238060 6/34 (18%)
LDLa 3467..3502 CDD:238060 5/34 (15%)
LDLa 3507..3541 CDD:238060 9/52 (17%)
LDLa 3546..3580 CDD:238060 5/33 (15%)
LDLa 3584..3618 CDD:238060 7/38 (18%)
LDLa 3625..3659 CDD:238060 7/33 (21%)
LDLa 3663..3698 CDD:238060 6/42 (14%)
LDLa 3705..3737 CDD:238060 4/31 (13%)
LDLa 3746..3782 CDD:238060 9/46 (20%)
LDLa 3793..3827 CDD:238060 9/46 (20%)
EGF_CA 3875..3909 CDD:214542
NHL 3972..4204 CDD:302697
NHL repeat 4002..4039 CDD:271320
NHL repeat 4060..4098 CDD:271320
Ldl_recept_b 4070..4111 CDD:459654
LY 4094..4133 CDD:214531
NHL repeat 4148..4186 CDD:271320
EGF_CA 4281..4315 CDD:238011
Blue background indicates that the domain is not in the aligned region.

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