DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CSN3 and RPN3

Sequence 1:NP_524190.2 Gene:CSN3 FlyBaseID:FBgn0027055 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_010938.1 Gene:RPN3 SGDID:S000000823 Length:523 Species:Saccharomyces cerevisiae

Alignment Length:429 Identity:84/430 (20%)
Similarity:148/430 (34%) Gaps:117/430 (27%)


  Fly    31 SLSLL-ARNWSILDNVLETL---------DMQQHSLGVLYVLLAKLHSASTANPEPVQLIQL-MR 84
            ||:|: |:.|..:....|||         |.|...|....:...|:.|....|.....||.| :|
Yeast   175 SLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDNETKAMLINLILR 239

  Fly    85 DFVQRNNNEQLRYAVCAFYETCHLFTEFVVQKNLSILGIRIISRAIDQIRQLETQLTPIHADLCL 149
            ||:  ||.|                                :..|.|.|.:||...|.:.:    
Yeast   240 DFL--NNGE--------------------------------VDSASDFISKLEYPHTDVSS---- 266

  Fly   150 LSLKAKNFSVVLPYLDADITDISTVAAECKTQQQQQSQHADANNDAKYFLLYFYYGGMIYTAVKN 214
             ||:|:                                             ||:|...|.....:
Yeast   267 -SLEAR---------------------------------------------YFFYLSKINAIQLD 285

  Fly   215 YERA-LYFFEVCITTPAMAMSHIMLEAYKKFLMVSLIVEGKIAYIPKNTQVIGRFMKPMANHYHD 278
            |..| .|........|..:.|...|:...|......::.|.|..:....|  ....|.:..:|| 
Yeast   286 YSTANEYIIAAIRKAPHNSKSLGFLQQSNKLHCCIQLLMGDIPELSFFHQ--SNMQKSLLPYYH- 347

  Fly   279 LVNVYANSSSEELRIIILKYSEAFTRDNNMGLAKQVATSLYKRNIQRLTKTFLTLSLSDVASRVQ 343
            |.........::....|.||.:...:|:...|..::.:::.|..|:.::.|:..:||.|:..::.
Yeast   348 LTKAVKLGDLKKFTSTITKYKQLLLKDDTYQLCVRLRSNVIKTGIRIISLTYKKISLRDICLKLN 412

  Fly   344 LASAVEAERYILNMIKSGEIYASINQKDGMVLFKDDPEKYNS--PEMFLNVQNNITHVLDQVRQI 406
            |.|....|..:...|:.|.|.|.||.:||.:...:....|:|  |:...:         ::::..
Yeast   413 LDSEQTVEYMVSRAIRDGVIEAKINHEDGFIETTELLNIYDSEDPQQVFD---------ERIKFA 468

  Fly   407 NKMEEEIILNPMYVKKALGSQDDDLTSQHPKTFSGDPTD 445
            |::.:|.:::..|       .:|..|.|:.|:.:|:..|
Yeast   469 NQLHDEYLVSMRY-------PEDKKTQQNEKSENGENDD 500

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CSN3NP_524190.2 PCI 275..378 CDD:279707 25/103 (24%)
RPN3NP_010938.1 PCI 343..447 CDD:307522 25/105 (24%)
Rpn3_C 450..509 CDD:312023 12/68 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C263256131
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.727 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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