DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nubp2 and nbp35

DIOPT Version :10

Sequence 1:NP_649243.1 Gene:Nubp2 / 40282 FlyBaseID:FBgn0037011 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_594626.1 Gene:nbp35 / 2543416 PomBaseID:SPAC637.08 Length:317 Species:Schizosaccharomyces pombe


Alignment Length:261 Identity:134/261 - (51%)
Similarity:185/261 - (70%) Gaps:7/261 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LDKVKNVIVVLSGKGGVGKSTVSTQLS--LALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQC 64
            |.::|:.|:||||||||||||.|:||:  |:|.::. ::||:|:|:||||:|.::|:|..:..|.
pombe    56 LKEIKHKILVLSGKGGVGKSTFSSQLAWGLSLEEDK-QIGLMDVDICGPSIPRIMGVEKEEAHQS 119

  Fly    65 DDGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGT 129
            ..||.|:|.  ...||||||||||.:.:..||||||||..:|:||:.||.|:.|||||:||||||
pombe   120 SKGWSPIYV--CPNLAVMSIGFLLPSEDSSVIWRGPKKNGLIKQFIKDVNWENLDYLIVDTPPGT 182

  Fly   130 SDEHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILGIVENMSGFVCPHCTSC 194
            ||||:::::..|..|..||::|||||||||.||||||.||:|..|.|||:||||||||||.|...
pombe   183 SDEHLSLVQFFKNSGIDGAVVVTTPQEVALQDVRKEIDFCRKASIPILGLVENMSGFVCPSCKGK 247

  Fly   195 TNIF--SSNGGVSLATYAQVPHLGTLPIDPRVGILAGTTTSVLDELPDSTTAEVLTHIVEKLKTM 257
            :|||  ::.||.:||....:|.||.:|:||.:........|.:||.|:|..:|::..|:.|:...
pombe   248 SNIFTITTGGGEALAKEMGLPFLGKIPLDPLIARSCDFGKSFIDECPESPASEIIIDIINKIDES 312

  Fly   258 L 258
            |
pombe   313 L 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nubp2NP_649243.1 ParA 4..254 CDD:431392 131/253 (52%)
nbp35NP_594626.1 ParA 59..300 CDD:431392 129/243 (53%)

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