DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5262 and C03A3.2

DIOPT Version :10

Sequence 1:NP_649223.1 Gene:CG5262 / 40258 FlyBaseID:FBgn0036988 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_509879.2 Gene:C03A3.2 / 181315 WormBaseID:WBGene00007267 Length:492 Species:Caenorhabditis elegans


Alignment Length:532 Identity:183/532 - (34%)
Similarity:276/532 - (51%) Gaps:93/532 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TYSNLVGFIFIFNLIVGTGALTLPGVFARAGWMLSLIVIVLLAIISYMTVTFIIEAMACANAIRN 77
            |||..||.:::||||||||||.||..|..|||:||:.::...|.:||:..||:|||::.|||:  
 Worm    12 TYSQTVGLLYVFNLIVGTGALALPKAFQTAGWLLSITLLTFSAFMSYVAATFVIEALSVANAV-- 74

  Fly    78 WQTLQALRQSRSSAENSENDDNADDVSLASGAEQVGDFERVPLTIQNREFHYYQLSHKFELGEMA 142
                  |.:.|..        ..|||.:|.|          |.|        :::|.|.|:.|||
 Worm    75 ------LSKKRRV--------EYDDVVVADG----------PST--------FEISKKVEVSEMA 107

  Fly   143 TLFFNEFGRVMFYLCLIVYLYGDLSIYSAAVARSLRDVVCDQTNGTDTNNLMYWPGDFENNTSLA 207
            ::|.::...|..|..:|:||:|||:|||..|.:|..::||...|.:..            .:|..
 Worm   108 SMFLSKVSLVFSYFAIIIYLFGDLAIYSTTVPKSAMNIVCATINASTV------------KSSDP 160

  Fly   208 C---WKEHTISRLNMYRVLLIGFTLIFG-PFVYFNVQKTKYLQMLTAAFRWMAFTLMICISLKLL 268
            |   |.| .::|:.:||..:|.|.::.. |.|...:.||:::|::|...||.||.|||.::...|
 Worm   161 CHESWPE-ILTRMTVYRFFVIIFVVVVCLPMVIAGITKTRHIQIMTTLSRWAAFILMISLATMQL 224

  Fly   269 ISRGAKGHPATFNVYGIPSLFGACVYSFMCHHSLPSLLAPIRHKSMVSKILSIDYIIICAFYILL 333
            .|.||..||..:|.:|..||||..||:||||||:|||:.|:|.|..|...:::.|.::..||..|
 Worm   225 SSDGAAAHPPAYNFHGFGSLFGCAVYAFMCHHSIPSLITPMRTKDNVFGKIALVYGVVGVFYFTL 289

  Fly   334 AMTGIFAFERIEDLYTLDFLPYDVAYVDFWSG----LLICIDYFLALFPIFTLSTSFPIVAITLK 394
            ::||.||||.::|:|||:|         |..|    :...||||||||||.||::|:||:|:||.
 Worm   290 SLTGAFAFEHVQDIYTLNF---------FHDGNTSFIYSIIDYFLALFPIITLTSSYPIIALTLI 345

  Fly   395 NNL---------------QSLFLDMSQYESYSV--------------ILRLCFPLLAIIPPFCIT 430
            ||.               :||....|..|....              :..:..|.|.:..|..::
 Worm   346 NNFNVVKDILCPKVGQENESLLEADSLVEDNDTDDEREARNARNEKSVFDVLVPALVLALPTFLS 410

  Fly   431 YFTESLSSLVAFTGTYAGTGIQYIIPVFLVYFARRTCSELLGSGVVNRFKSPFKSSAWLVFVFIW 495
            ..|:.:..|.:.||::.|..:|:.||..||..||:....:|...|..:..|||:|..|:|.:..|
 Worm   411 LLTDDMLLLASITGSFPGVAVQFAIPCLLVTAARKHARSVLNFPVPRKNNSPFQSPIWIVLISSW 475

  Fly   496 SILCVCLVSINL 507
            :...:.:|.:||
 Worm   476 AGFSMIMVLLNL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5262NP_649223.1 SLC5-6-like_sbd 15..502 CDD:444915 178/523 (34%)
C03A3.2NP_509879.2 SLC5-6-like_sbd 22..>332 CDD:444915 137/365 (38%)

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