Protein Alignment CG5618 and SecS

DIOPT Version :10

• Sequence 1: NP_649211.1
• Gene: CG5618 / 40241
• FlyBaseID: FBgn0036975
• Length: 510
• Species: Drosophila melanogaster
• Sequence 2: NP_649556.3
• Gene: SecS / 40681
• FlyBaseID: FBgn0037347
• Length: 478
• Species: Drosophila melanogaster
• Alignment Length: 352
• Identity: 67/352 - (19%)
• Similarity: 123/352 - (34%)
• Gaps: 110/352 - (31%)

  Fly    50 IVPFLQPDKLK-ELINLKV---RE---------------TENC-------SLAEIEELCQQ-VIH 87
            :||.:.|..:| |.:|..|   ||               |.:|       .:||:.:|.:| .|.
  Fly   184 LVPVVIPCLIKGESLNTNVDLFREKIKSLGVDSILCLYTTTSCFAPRNSDDIAEVSKLSKQWQIP 248

  Fly    88 YSVKTSHGRFHNQLFGQLDPFGLAGALVTEAMNGSTYTYEVAPVFSLIETEVIATICKLAGYKEG 152
            :.|..::|....::..||:.....|.:  :....|:....:.||.|.|          :|.:.|.
  Fly   249 HLVNNAYGLQAKEIVNQLECANRVGRI--DYFVQSSDKNLLVPVGSAI----------VASFNES 301

  Fly   153 -----DGIFAPGGSTSNMYGMVLARYKIAPEVKTSGMFGMRPLVLFTSDESHYSFVKAANWLGLG 212
                 ...:|...|.|....:::....:       |..|.|  :||.....::::::.    .|.
  Fly   302 VLHDVASTYAGRASGSQSLDVLMTLLSL-------GRNGFR--LLFDQRGENFNYLRE----NLR 353

  Fly   213 SYNCVSVRTNERGQMLLDDLEAKIAEAKARGGEPFFVNCTAGTTVLGAFDDINGAADVTERHGLW 277
            .:      ...||::::|.....|:.|           .|..|.   |.|.:.....:    |..
  Fly   354 KF------AEPRGEIVIDSRFNSISLA-----------ITLATL---AGDQMKSITKL----GSM 394

  Fly   278 LHVDACLGGAALLSAKNRS------LIAGLERANSFSWNPHKTIGAPLQCSLFLTRESGRLLERC 336
            ||:....|...::..:|::      |..|..|:|  ...|:.|:.|    .:.:|||
  Fly   395 LHMRGVSGARVIVPGQNKTIDGHEFLDFGSHRSN--LQVPYLTVAA----GIGITRE-------- 445

  Fly   337 NSTEAHYLFQQDKFYDVSYDTGNKSVQ 363
                     :.|||:|:.....|:..|
  Fly   446 ---------EIDKFFDIFNKCWNQIFQ 463

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5618	NP_649211.1	GadA	56..507	CDD:439846	65/346 (19%)
SecS	NP_649556.3	AAT_I	12..457	CDD:450240	65/344 (19%)