DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5618 and hdc

DIOPT Version :10

Sequence 1:NP_649211.1 Gene:CG5618 / 40241 FlyBaseID:FBgn0036975 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_017947930.2 Gene:hdc / 100497702 XenbaseID:XB-GENE-979207 Length:672 Species:Xenopus tropicalis


Alignment Length:443 Identity:106/443 - (23%)
Similarity:191/443 - (43%) Gaps:57/443 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KQKIVPFLQPDKLKELI-NLKVRETENCS--LAEIEELCQQ-VIHYSVKTSHGRFHNQLFGQLDP 107
            ::::.|.:||..::.|: :....|:|:..  ..:||::... |:|:.....|.     .|..|..
 Frog    53 ERRVNPDVQPGYMRALLPDSAPVESESWERIFRDIEDIIMPGVVHWQSPHMHA-----YFPALTS 112

  Fly   108 F-GLAGALVTEAMNGSTYTYEVAPVFSLIETEVIATICKLAGY----------KEGDGIFAPGGS 161
            : .|.|.::.:|:|...:|:..:|..:.:|..|:..:.|:.|.          .:|.|:.....|
 Frog   113 WPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPCHFLHHYPSSKGGGVLQSTVS 177

  Fly   162 TSNMYGMVLARYKIAPEVKTS------GMFGMRPLVLFTSDESHYSFVKAANWLGLGSYNCVSVR 220
            .|.:..::.||.....|:|||      .....| |:.:.|:::|.|..||      |..:.|.||
 Frog   178 ESTLIALLAARKNKILEMKTSEPDSDDSQLNSR-LIAYASNQAHSSVEKA------GLISLVKVR 235

  Fly   221 ---TNERGQMLLDDLEAKIAEAKARGGEPFFVNCTAGTTVLGAFDDINGAADVTERHGLWLHVDA 282
               .:|...:..|.|:|.:.|.:..|..|.||..|.|||.:.|||.:.....|..|..||||:||
 Frog   236 FLPVDENFCLRGDTLKAAVEEDRKNGLVPVFVCATLGTTGVCAFDYLAELGPVCAREKLWLHIDA 300

  Fly   283 CLGGAALLSAKNRSLIAGLERANSFSWNPHKTIGAPLQCSLFLTRESGRLLERCNSTEAHYLFQQ 347
            ...|.|.|..:.|:|:.|::.|:||::||.|.:.....|:.|..::..:|.:         .|..
 Frog   301 AYAGTAFLCPEFRTLMNGVDYADSFTFNPSKWMMVHFDCTAFWVKDKYKLQQ---------TFSV 356

  Fly   348 DKFYDVSYDTG------NKSVQCGRKIDAFKFWLMLKARGYGKYGLMVDHAIHIARLLEGKLRQR 406
            :..|....:||      :..:...|:..:.|.|.::::.|.......:.|...:|:..|..:  .
 Frog   357 NPIYLRHANTGAATDFMHWQIPLSRRFRSLKLWFVIRSFGVKNLQAHIRHGAELAKYFESLV--T 419

  Fly   407 GDRFRLVIPEHEYSNVCFWFIPKAMRVSSEEETPEWW--SRLYTVAPKIKEQM 457
            .|:...|..:.....|.|..  |...|.:||...|..  .::|.|...|.:::
 Frog   420 SDQMFEVPAKRHLGLVVFRL--KGPNVLTEEVLAELTKSGKMYLVPATINDEL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5618NP_649211.1 GadA 56..507 CDD:439846 104/434 (24%)
hdcXP_017947930.2 Pyridoxal_deC 62..440 CDD:395219 96/402 (24%)

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