DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5618 and gad1.2

DIOPT Version :10

Sequence 1:NP_649211.1 Gene:CG5618 / 40241 FlyBaseID:FBgn0036975 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_012819752.1 Gene:gad1.2 / 100145511 XenbaseID:XB-GENE-5830282 Length:554 Species:Xenopus tropicalis


Alignment Length:510 Identity:225/510 - (44%)
Similarity:324/510 - (63%) Gaps:34/510 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DGAETVDQIRDGLMDDWKILENVFHLLRKEDTFCVDPQKWDKQKIVPFLQPDKLKELI---NLKV 67
            :|.:..:|.   |::..:||.|  |:.:..|         .:.|::.|..|.:|.|.:   ||::
 Frog    68 NGEKCTEQF---LIEVLRILLN--HIKKTYD---------GESKVLDFHHPHQLLEGLEGFNLEL 118

  Fly    68 RETENCSLAEIEELCQQVIHYSVKTSHGRFHNQLFGQLDPFGLAGALVTEAMNGSTYTYEVAPVF 132
            .:... .|.:|...|...:.||:||.|.|:.|||...||..||||..:|...|.:.:|||:||||
 Frog   119 SDQPE-PLEQILVDCSDTLKYSIKTGHPRYFNQLSCGLDIIGLAGEWLTATANTNMFTYEIAPVF 182

  Fly   133 SLIETEVIATICKLAGY--KEGDGIFAPGGSTSNMYGMVLARYKIAPEVKTSGMFGMRPLVLFTS 195
            .::|..|:..:.::.|:  .|.||||:|||:.||:|.:..||||..|.|||.||..:..:|:|||
 Frog   183 IIMEEIVLKKMQEIIGWGENEADGIFSPGGTISNLYSLQAARYKYFPMVKTKGMAALPQIVIFTS 247

  Fly   196 DESHYSFVKAANWLGLGSYNCVSVRTNERGQMLLDDLEAKIAEAKARGGEPFFVNCTAGTTVLGA 260
            ::|||||.||:..||:|:.|.::::.:|||:|:..|||.||.:||.:|..||:|:.||||||.||
 Frog   248 EQSHYSFKKASAILGIGTDNVIAIKCDERGKMIPSDLEDKILKAKRQGQHPFYVSATAGTTVYGA 312

  Fly   261 FDDINGAADVTERHGLWLHVDACLGGAALLSAKNRSLIAGLERANSFSWNPHKTIGAPLQCSLFL 325
            ||.:...||:.:|:|||:||||..||..|||.|:|..:.|:|||||.:|||||.:|.|||||..|
 Frog   313 FDPLITIADICKRYGLWMHVDAAWGGGLLLSKKHRYKMNGIERANSVTWNPHKIMGVPLQCSAIL 377

  Fly   326 TRESGRLLERCNSTEAHYLFQQDKFYDVSYDTGNKSVQCGRKIDAFKFWLMLKARGYGKYGLMVD 390
            .|:.| ||:.||...|.||||.||.||.:||||:|::||||.:|.||.|||.||:|...:.|.::
 Frog   378 IRQKG-LLQACNQQCADYLFQMDKPYDTAYDTGDKTIQCGRHVDIFKLWLMWKAKGSCGFELQIN 441

  Fly   391 HAIHIARLLEGKLRQRGDRFRLVIPEH-EYSNVCFWFIPKAMRVSSEEETP---EWWSRLYTVAP 451
            ..:.::..|..||:.:.: |.||..:. ||:|||||:||.::     |..|   ||.:||:.:||
 Frog   442 RCLELSEYLYNKLQSKSN-FELVFRDKPEYTNVCFWYIPPSL-----EHVPRDKEWKARLHKIAP 500

  Fly   452 KIKEQMAHSGTLMIGYSPLKAKNLGNFFRMVFTCFPILKSKELDFILDEIERLGE 506
            :||.:|...||:|:.|.|...|  .|||||||: .|..|..::||:|:||||||:
 Frog   501 QIKARMMEEGTVMVSYQPQGDK--PNFFRMVFS-NPASKKSDVDFLLEEIERLGK 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5618NP_649211.1 GadA 56..507 CDD:439846 215/460 (47%)
gad1.2XP_012819752.1 Pyridoxal_deC 104..478 CDD:395219 178/376 (47%)

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