Protein Alignment Clc and CLC2

DIOPT Version :9

• Sequence 1: NP_001163480.1
• Gene: Clc / 40221
• FlyBaseID: FBgn0024814
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_565921.1
• Gene: CLC2 / 818594
• AraportID: AT2G40060
• Length: 258
• Species: Arabidopsis thaliana
• Alignment Length: 246
• Identity: 68/246 - (27%)
• Similarity: 99/246 - (40%)
• Gaps: 73/246 - (29%)

  Fly     5 DDFAAKEDVDPAAEFLAREQ-SAL-GDLEAEITGGSASAPPAASTDEGLGELLGGTASEGDLLSA 67
            ||  |.|.|..:..|.|.:. ||. |.|:.|.:.....|.|::..         |..|.||
plant    14 DD--ASESVPVSGSFDATDSFSAFDGSLQVEDSVDDVFAAPSSDY---------GAYSNGD---- 63

  Fly    68 GGTGGLESSTGSFEVIGGESNEPVGISGPPPSREEPEK---IRKWREEQKQRLEEKDIEEERKKE 129
                |:..|.|..:          |...||||..|.::   :|:||.:...:||||    |::::
plant    64 ----GIFGSNGDHD----------GPILPPPSEMESDEGFALREWRRQNAIQLEEK----EKREK 110

  Fly   130 ELRQQSKKELDDWLRQIGESISKT----KLASRNAEKQAATLENG----TIEPGTEWERIAKLC- 185
            ||.:|..:|.|.:..:..:.|..|    |.|:|  ||:...|||.    .......|:.||:|.
plant   111 ELLKQIIEEADQYKEEFHKKIEVTCENNKAANR--EKEKLYLENQEKFYAESSKNYWKAIAELVP 173

  Fly   186 -----------------DFNPKVN-----KAGK--DVSRMRSIYLHLKQNP 212
                             ...|.|:     |.||  |::|||.|.:.||.||
plant   174 KEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNP 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clc	NP_001163480.1	Clathrin_lg_ch	6..212	CDD:279433	65/243 (27%)
CLC2	NP_565921.1	Clathrin_lg_ch	<62..221	CDD:395863	48/182 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10639
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	2	2.060