DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grasp65 and gorasp1a

DIOPT Version :10

Sequence 1:NP_649160.1 Gene:Grasp65 / 40177 FlyBaseID:FBgn0036919 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_005171287.1 Gene:gorasp1a / 492770 ZFINID:ZDB-GENE-030826-23 Length:461 Species:Danio rerio


Alignment Length:449 Identity:172/449 - (38%)
Similarity:246/449 - (54%) Gaps:83/449 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PGGGTEGYHVLKVQDNSPGQKAGLEAFFDFIVAIAGTRLDQDNDMLKELLRQNVDKPVRLTVYSS 74
            |.||||||||..||::||.::||||.|||||::|...||:|:|||||:||:.||:|||::.|||:
Zfish    11 PEGGTEGYHVHGVQEDSPAERAGLEPFFDFIISIGHNRLNQENDMLKDLLKANVEKPVKMEVYST 75

  Fly    75 KTQTVRELTLTPSNNWGGQGLLGVSIRFCSFEGANESVWHILEVHPNSPAELAGLRAYSDYVIGA 139
            ||..:|||.:.|||.||||||||.|:|||||:||||:|||:|:|..||||.||||:.:||:::||
Zfish    76 KTMRMRELEVVPSNMWGGQGLLGASVRFCSFQGANENVWHVLDVESNSPAALAGLQEHSDFIVGA 140

  Fly   140 DAIRHENDDLFTLIETHEQQPLKMYVYNLDDDACREVTIKPNTAWGGEGALGCGIGFGYLHRIPV 204
            |.:..:::|.|:|||.||.:|||:.:||.:.|.||||.:.||.||||||:||||||:|||||||.
Zfish   141 DQVLQDSEDFFSLIEAHEGKPLKLLIYNTETDKCREVIVTPNGAWGGEGSLGCGIGYGYLHRIPA 205

  Fly   205 QAEPVTS---SSAAVPAAAAAESTAPL-------LTAGGAAPAGAQVAQVVSPTLPYIPPLANTF 259
            |.|...|   ||...|.|...|...|.       |.|.|.:.:|                     
Zfish   206 QPEGPKSEKVSSRESPVAGNPEQEYPTNGFSEVSLMASGQSLSG--------------------- 249

  Fly   260 GSTNAEVRPPTIEPPAQSLFKTYFNPDEATDALTAALESQAT-IAEPVSVPAPPAVADVSVAQPQ 323
                .::..| :.||.|.:    .:|..:..:..|.:.|:.: ||:.:.:    :.:.:.:....
Zfish   250 ----MDLETP-LPPPIQRV----MDPGFSDHSEVALMNSEVSDIADRLDL----STSSIDMTNTS 301

  Fly   324 VQVPAPAQPLPPPANIFIPGVFDPSTQQNANALGGIPAAQLPFPQATAAPAAVPMFSA---PQQA 385
            :.|...|.         :.||   ...|:::...|.|..|:     |...:||...|:   |..|
Zfish   302 LAVKEDAD---------VSGV---EELQDSDFHSGDPEEQI-----TEEYSAVDFSSSITPPSNA 349

  Fly   386 YMSAPAALSYPAGAQTVPSYPQVQPSMGGLFPTQPTPLPPQMAHVFAPPVPPQAGAAPA 444
              |.|.:||:    ..:|:            ||....:|..:|.:....:||...:.||
Zfish   350 --SPPLSLSH----SLLPN------------PTLENSVPTDVASLMNSSIPPLDSSIPA 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grasp65NP_649160.1 PDZ_canonical <14..100 CDD:483948 54/85 (64%)
GRASP55_65 69..205 CDD:427981 85/135 (63%)
gorasp1aXP_005171287.1 PDZ_canonical <15..101 CDD:483948 54/85 (64%)
GRASP55_65 70..206 CDD:427981 85/135 (63%)

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