DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtr3 and AT3G46210

DIOPT Version :10

Sequence 1:NP_649157.1 Gene:Mtr3 / 40173 FlyBaseID:FBgn0036916 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_190207.1 Gene:AT3G46210 / 823766 AraportID:AT3G46210 Length:239 Species:Arabidopsis thaliana


Alignment Length:228 Identity:61/228 - (26%)
Similarity:98/228 - (42%) Gaps:32/228 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 REPTQLAP----RNTFIRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRMNMGVLNCYV 100
            |.|.||.|    ||      :|....|||....|:|||||.|..||    |..::.......|:.
plant     9 RTPNQLRPLACSRN------ILHRPHGSASWSQGDTKVLAAVYGPK----AGTKKNENAEKACFE 63

  Fly   101 NFAAFSTGDLDSVPERERHLSSMLTKAMEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGV 165
            ......:|.:..|   |:....:|.:.::.:...|...|....:.:.::.|||.||..|||....
plant    64 VIWKPKSGQIGKV---EKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACA 125

  Fly   166 ALVECGISTYDLITASTACIYRD-HVFLNPSAKVEE--------LLWKHRNSST---DSTTSPSS 218
            |||:.||....|..|...|:..: ::.|:|: |:||        |::.:...|.   .|:.:...
plant   126 ALVDAGIPMKHLAVAICCCLAENGYLVLDPN-KLEEKKMTAFAYLVFPNTTLSVLPEGSSVAEGE 189

  Fly   219 AQEHGLI--ITASMDTFEQIAQCQQCGYLSPAT 249
            ..|||:|  ||..:.:.:....|.:.|..:.|:
plant   190 PVEHGIITSITHGVMSVDDYFLCVENGRAATAS 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtr3NP_649157.1 RNase_PH 47..274 CDD:446015 57/221 (26%)
AT3G46210NP_190207.1 RNase_PH_RRP46 14..228 CDD:206777 58/223 (26%)

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