DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtr3 and EXOSC4

DIOPT Version :10

Sequence 1:NP_649157.1 Gene:Mtr3 / 40173 FlyBaseID:FBgn0036916 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_061910.1 Gene:EXOSC4 / 54512 HGNCID:18189 Length:245 Species:Homo sapiens


Alignment Length:230 Identity:62/230 - (26%)
Similarity:99/230 - (43%) Gaps:23/230 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 RAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRM-NMGVLNCYVNFAAFSTGDLDSVPER 116
            |.||.....||||:|.||||.||:|..|.|:..:.||.: :..::||..:.|.||||:....|..
Human    28 RMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARALPDRALVNCQYSSATFSTGERKRRPHG 92

  Fly   117 ERHLSSM---LTKAMEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVALVECGISTYDLI 178
            :|....|   |.:..|..:........|:||.|.:|..||...:..:|...:|:::.||...|.:
Human    93 DRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFV 157

  Fly   179 TASTACIYRDHVFLNPSAKVEELLWKHRNSSTDSTTSPSSAQEHGLIITASMDTFEQIAQCQQCG 243
            .|.:|. :.|...|...:.|||           :...|..|       .|.:....|||..:...
Human   158 CACSAG-FVDGTALADLSHVEE-----------AAGGPQLA-------LALLPASGQIALLEMDA 203

  Fly   244 YLSPATYVKLLDYTLAINKSLRELVKGVLTKRVKE 278
            .|......::|:......:.:..|:..|:.:.|:|
Human   204 RLHEDHLERVLEAAAQAARDVHTLLDRVVRQHVRE 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtr3NP_649157.1 RNase_PH 47..274 CDD:446015 60/224 (27%)
EXOSC4NP_061910.1 RNase_PH_RRP41 11..237 CDD:206775 60/227 (26%)

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