Protein Alignment Mtr3 and Ski6

DIOPT Version :10

• Sequence 1: NP_649157.1
• Gene: Mtr3 / 40173
• FlyBaseID: FBgn0036916
• Length: 326
• Species: Drosophila melanogaster
• Sequence 2: NP_609618.2
• Gene: Ski6 / 34721
• FlyBaseID: FBgn0032487
• Length: 246
• Species: Drosophila melanogaster
• Alignment Length: 262
• Identity: 69/262 - (26%)
• Similarity: 116/262 - (44%)
• Gaps: 32/262 - (12%)

  Fly    33 ESLDKPSREPTQLAPRNTFIRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRMNMGVLN 97
            :.|....|.|.:|  |....:.||.....||||||.|||||||.|..|.:    :.......|:|
  Fly    11 QGLRLDGRRPHEL--RRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQ----AKGNQTESVIN 69

  Fly    98 CYVNFAAFSTGDLDSVPERER---HLSSMLTKAMEPVVCRTEFLNFQLDIRVLILDDDGCLLSTA 159
            |..:.|.|||.:..:.|..:|   .....|.:|:...:....:...|:||.|.:|.|||...:.|
  Fly    70 CQYSQATFSTAERKNRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIYVEVLQDDGANYAVA 134

  Fly   160 INCCGVALVECGISTYDLITASTACIYRDHVFLNPSAKVEELLWKHRNSSTDSTTSPSSAQEHGL 224
            :|...:||::.||...:.|.|.||.:.:.::.|...::.||:           :..|.
  Fly   135 LNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQFEEV-----------SGGPK------- 181

  Fly   225 IITASMDTFEQIAQCQQCGYLSPATYVKLLDYTLAINKSLRELVKGVLTKRVKEQHELDLREKAE 289
            :..|::.|.|:||..:    :|...::..|:..:....:....::.:|...||| |.|.:...::
  Fly   182 LTVAALPTAEKIAFLE----MSERFHIDHLETVIETAMAGCREIRDILEAAVKE-HLLHMGSASD 241

  Fly   290 TA 291
            .|
  Fly   242 FA 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mtr3	NP_649157.1	RNase_PH	47..274	CDD:446015	59/229 (26%)
Ski6	NP_609618.2	RNase_PH_RRP41	12..233	CDD:206775	66/249 (27%)