Protein Alignment Mtr3 and Exosc5

DIOPT Version :10

• Sequence 1: NP_649157.1
• Gene: Mtr3 / 40173
• FlyBaseID: FBgn0036916
• Length: 326
• Species: Drosophila melanogaster
• Sequence 2: NP_001100963.2
• Gene: Exosc5 / 308441
• RGDID: 1307861
• Length: 235
• Species: Rattus norvegicus
• Alignment Length: 220
• Identity: 51/220 - (23%)
• Similarity: 84/220 - (38%)
• Gaps: 47/220 - (21%)

  Fly    43 TQLAPRNTF-------IRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRMNMGVLNCYV 100
            |:.:||:..       ....:|:...|||....|:|.|||.|..|.| ::.|....|...|...:
  Rat    17 TESSPRSPVCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAE-VKVSKEIFNKATLEVIL 80

  Fly   101 NFAAFSTGDLDSVPERERHLSSMLTKAMEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGV 165
            .    ....|..|.|:.|  ..::....|.||.........:.:.:.::.|.|.||:..:|...:
  Rat    81 R----PKIGLPGVAEKSR--ERLIRNTCEAVVLGALHPRTSITVVLQVVSDTGSLLACCLNAACM 139

  Fly   166 ALVECGISTYDLITASTACIYRD-HVFLNPSAKVEELLWKHRNSSTDSTTSPSSAQEHGLIITAS 229
            |||:.|:....|....|..:..| ::.|:|:.|.|                    :|...|:|.:
  Rat   140 ALVDAGVPMRALFCGVTCALDPDGNLVLDPTTKQE--------------------KEARAILTFA 184

  Fly   230 MDTFEQ------------IAQCQQC 242
            :|:.||            .|:.|||
  Rat   185 LDSAEQKLLMSATKGLYSDAELQQC 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mtr3	NP_649157.1	RNase_PH	47..274	CDD:446015	50/216 (23%)
Exosc5	NP_001100963.2	RNase_PH_RRP46	28..225	CDD:206777	48/209 (23%)