Protein Alignment Mtr3 and Exosc6

DIOPT Version :10

• Sequence 1: NP_649157.1
• Gene: Mtr3 / 40173
• FlyBaseID: FBgn0036916
• Length: 326
• Species: Drosophila melanogaster
• Sequence 2: NP_001387896.1
• Gene: Exosc6 / 307850
• RGDID: 1309832
• Length: 272
• Species: Rattus norvegicus
• Alignment Length: 232
• Identity: 70/232 - (30%)
• Similarity: 102/232 - (43%)
• Gaps: 38/232 - (16%)

  Fly    25 PQESED----FFESLDKP-SREPTQLAPRNTFIRAGVLTTVRGSAYMEYGNTKVLAIVAPPKEL- 83
            |:||:.    ..|..:.| :|:||:|.|  .:.|||:|:..:||||:|.|.||||..|:.|::.
  Rat    11 PEESQPPQLYAAEEDETPAARDPTRLRP--VYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAE 73

  Fly    84 ----------IRASARRMNMGVLNCYVNFAAFSTGDLDSVPE---RERHLSSMLTKAMEPVVCRT 135
                      ....|.....|.|.|....|.|| |.....|:   .:|.|...|.:|:||.|...
  Rat    74 GGERGGGPAGAGGEAPAALRGRLLCDFRRAPFS-GRRRRAPQGSSEDRELGLALQEALEPAVRLG 137

  Fly   136 EFLNFQLDIRVLILDDDGCLLSTAINCCGVALVECGISTYDLITASTACIYRDHVFLNPSAKVEE 200
            .:...||::..|:|:|.|..|:.|:....:||.:.|:..|||:   ..|    .:.|.|......
  Rat   138 RYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV---VGC----GLSLTPGPSPTW 195

  Fly   201 LLWKHRNSSTDSTTSPSSAQEHGLIITASMDTFEQIA 237
            ||        |.|.......|.||.: |.|....|:|
  Rat   196 LL--------DPTRLEEEHSEAGLTV-ALMPVLNQVA 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mtr3	NP_649157.1	RNase_PH	47..274	CDD:446015	61/205 (30%)
Exosc6	NP_001387896.1	RNase_PH_MTR3	36..260	CDD:206776	62/207 (30%)