DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtr3 and Exosc5

DIOPT Version :10

Sequence 1:NP_649157.1 Gene:Mtr3 / 40173 FlyBaseID:FBgn0036916 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_613052.1 Gene:Exosc5 / 27998 MGIID:107889 Length:235 Species:Mus musculus


Alignment Length:220 Identity:51/220 - (23%)
Similarity:84/220 - (38%) Gaps:47/220 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TQLAPRNTF-------IRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRMNMGVLNCYV 100
            |:.:||:..       ....:|:...|||....|:|.|||.|..|.| ::.|....|...|...:
Mouse    17 TESSPRSPVCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAE-VKVSKEIFNKATLEVIL 80

  Fly   101 NFAAFSTGDLDSVPERERHLSSMLTKAMEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGV 165
            .    ....|..|.|:.|  ..::....|.||.........:.:.:.::.|.|.||:..:|...:
Mouse    81 R----PKIGLPGVAEKSR--ERLVRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACM 139

  Fly   166 ALVECGISTYDLITASTACIYRD-HVFLNPSAKVEELLWKHRNSSTDSTTSPSSAQEHGLIITAS 229
            |||:.|:....|....|..:..| ::.|:|:.|.|                    :|...|:|.:
Mouse   140 ALVDAGVPMRALFCGVTCALDSDGNLVLDPTTKQE--------------------KEARAILTFA 184

  Fly   230 MDTFEQ------------IAQCQQC 242
            :|:.||            .|:.|||
Mouse   185 LDSAEQKLLMSTTKGLYSDAELQQC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtr3NP_649157.1 RNase_PH 47..274 CDD:446015 50/216 (23%)
Exosc5NP_613052.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 1/3 (33%)
RNase_PH_RRP46 28..225 CDD:206777 48/209 (23%)

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