DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Mtr3 and crn-5

Sequence 1:NP_649157.1 Gene:Mtr3 FlyBaseID:FBgn0036916 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_496284.1 Gene:crn-5 WormBaseID:WBGene00000798 Length:214 Species:Caenorhabditis elegans

Alignment Length:148 Identity:32/149 (21%)
Similarity:61/149 (41%) Gaps:19/149 (13%)


  Fly    57 LTTVRGSAYMEYGNTKVLAIVAPPKEL--IRASARRMNMGV---LNCYVNFAAFSTGDLDSVPER 116
            |....|||....|.|.:.|..:.|.::  .:||...|.:.:   .||         ||     .:
 Worm    15 LKNADGSACFSQGATCIWASCSGPGDVHASKASDEAMTLDISYRANC---------GD-----NK 65

  Fly   117 ERHLSSMLTKAMEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVALVECGISTYDLITAS 181
            ...|::::...:...:....|.:..:.:.|..:.|||.:.:.|||....||::.|:....:....
 Worm    66 FNVLNNIIHSTLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFALLDNGMPFETVFCGV 130

  Fly   182 TACIYRDHVFLNPSAKVE 199
            .....:|.:.::|:||.|
 Worm   131 LIVRVKDELIIDPTAKQE 148

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Mtr3NP_649157.1 RNase_PH 47..274 CDD:295670 32/149 (21%)
crn-5NP_496284.1 RNase_PH_RRP46 5..202 CDD:206777 32/149 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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