DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mi-2 and Phf21b

DIOPT Version :10

Sequence 1:NP_001014591.1 Gene:Mi-2 / 40170 FlyBaseID:FBgn0262519 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_001074635.2 Gene:Phf21b / 271305 MGIID:2443812 Length:487 Species:Mus musculus


Alignment Length:169 Identity:43/169 - (25%)
Similarity:65/169 - (38%) Gaps:59/169 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 SADEK----EAPVSSKADNSA---PAAQDDGSGAPVVR------KKAKTKIG------------- 352
            |||:|    :..|.::.::||   |..::...||...:      |:...||.             
Mouse   184 SADKKVIIIQPQVKTQPESSAEPEPPTEEPSQGAQATKEDQPPSKENPEKIAFMVALGLVTTEHL 248

  Fly   353 ---NKFKKKNKLKKTKN-----FPEGE-------------------------DGEHEHQDYCEVC 384
               ...:::.|.:.|.|     |.|.|                         .||..|.::|..|
Mouse   249 EEIQSKRQERKRRSTANPAYSGFLETERKRLASSYLHNPLFLTARANEDPCWKGEITHDEFCAAC 313

  Fly   385 QQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCE 423
            ::|..:..|.||..||||.||:|.|..||:|.|.||.|:
Mouse   314 KRGASLQPCGTCSGAYHLSCLDPPLKTPPKGLWVCPKCQ 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mi-2NP_001014591.1 CHDNT 138..191 CDD:462357
TNG2 <282..422 CDD:227367 42/166 (25%)
PHD1_CHD_II 380..422 CDD:277006 20/41 (49%)
PHD2_CHD_II 440..482 CDD:277007
CD1_tandem_CHD3-4_like 487..557 CDD:349314
CD2_tandem_CHD3-4_like 610..664 CDD:349309
PLN03142 720..>1234 CDD:215601
DUF1087 <1292..1334 CDD:461922
CHDII_SANT-like 1380..1517 CDD:461920
CHDCT2 1757..1902 CDD:462358
Phf21bNP_001074635.2 PHA03247 <62..173 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..229 6/32 (19%)
TNG2 <253..355 CDD:227367 30/100 (30%)
PHD_SF 309..351 CDD:473978 20/41 (49%)
Blue background indicates that the domain is not in the aligned region.

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