DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mi-2 and LOC1272503

DIOPT Version :10

Sequence 1:NP_001014591.1 Gene:Mi-2 / 40170 FlyBaseID:FBgn0262519 Length:1983 Species:Drosophila melanogaster
Sequence 2:XP_311416.5 Gene:LOC1272503 / 1272503 VectorBaseID:AGAMI1_015145 Length:666 Species:Anopheles gambiae


Alignment Length:538 Identity:185/538 - (34%)
Similarity:284/538 - (52%) Gaps:40/538 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   674 TQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEG 738
            :|..|||..:....|.|::..|:.....|    :....:...::.:.|:::...   :..|||.|
Mosquito    51 SQEHSKKKAQPTNGKRKLKSIENLRKDDY----DNNNNEDAIEFTETPSYMNAV---MRDYQIAG 108

  Fly   739 INWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWA 803
            :|||...:...::.|||||||||||||:::.:..|......:|||||.||||||.||..||..:.
Mosquito   109 LNWLISLYNNNLNGILADEMGLGKTIQSISMIGYLLNVRKLKGPFLVVVPLSTLPNWLNEFNKFL 173

  Fly   804 PDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSI 868
            |        |.|    |:|.:.:..::..|    ..:||.::..:||.:||||.::.:.....|.
Mosquito   174 P--------GAK----VLRAHMVGPQKTEI----FRKLRASKPTWNVAITSYEFMANNRGSFTST 222

  Fly   869 DWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAF 933
            ::...::||.||.|:..:.|..:|....|...::|||||:.|||.||:.|||.|....||....|
Mosquito   223 NFHYAIIDEGHRAKNENTIFAGVLRRCKIQSMVMLTGTPVHNNLHELWALLNLLMPLFFNSADNF 287

  Fly   934 QGEF-----ADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFIL 993
            ...|     .| .|.||..||.::|.|.:|||.|.:|..::|.|....:.|..:.....:...:|
Mosquito   288 DSWFKVEDCVD-PKHEQTIRLKKLLKPLLLRRTKKEVTSDIPPKVHIDIYVPPTEQMCLWTHKVL 351

  Fly   994 TKNYEALNSKSGGGSCSLINI---MMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKL 1055
            .:..:.:   .|.|....:.|   :..::|...||||.|.|....|...     .:.:.:.:.|:
Mosquito   352 HREVKLI---MGSGETKEMRIASRLPHMRKVIQHPYLIPGAENLNTNLV-----TDEIVQFSSKM 408

  Fly  1056 VLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGA 1120
            ::|.|:|.:.:|:..:||||||...:|.:|.|:|:..:|:|..::|......|||.::.||.|.:
Mosquito   409 IVLDKLLARQRARGSKVLIFSQFVTVLYLLMDYLDWREYEYCMLEGHTDIAERQEQMNEFNRPDS 473

  Fly  1121 QQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEE 1185
            .:||||||||||||||||..|||||.||.|:||..|.||..|||||||..||.::|.:.|.|::|
Mosquito   474 TKFVFLLSTRAGGLGINLPAADTVIFYDMDFNPQMDFQAEDRAHRIGQQRKVHVFRLLVRGSIDE 538

  Fly  1186 RVTQVAKRKMMLTHLVVR 1203
            .:...::||..|...|:|
Mosquito   539 LLYLHSERKRQLDEAVIR 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mi-2NP_001014591.1 CHDNT 138..191 CDD:462357
TNG2 <282..422 CDD:227367
PHD1_CHD_II 380..422 CDD:277006
PHD2_CHD_II 440..482 CDD:277007
CD1_tandem_CHD3-4_like 487..557 CDD:349314
CD2_tandem_CHD3-4_like 610..664 CDD:349309
PLN03142 720..>1234 CDD:215601 177/492 (36%)
DUF1087 <1292..1334 CDD:461922
CHDII_SANT-like 1380..1517 CDD:461920
CHDCT2 1757..1902 CDD:462358
LOC1272503XP_311416.5 None
Blue background indicates that the domain is not in the aligned region.

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