DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and AT5G59840

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_200792.1 Gene:AT5G59840 / 836105 AraportID:AT5G59840 Length:216 Species:Arabidopsis thaliana


Alignment Length:178 Identity:124/178 - (69%)
Similarity:149/178 - (83%) Gaps:4/178 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQER 69
            ||||.||||||||||||:|:|.|||:.:|.|:||:||||||||||||||.|:|||||||||||||
plant    12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTD-KRQVSK 133
            |||||||||||||||:||||:|.|.||.||:|||||||::||.:|.|:|:|||.::.: ||.|.|
plant    77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPK 141

  Fly   134 ERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIK---AKTEKRME 178
            .:|:.||.||||||.|||||.::||||.|.::|.|||   |.|:.|.|
plant   142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRAE 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 119/169 (70%)
AT5G59840NP_200792.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 119/166 (72%)

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