DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab8 and Rab27b

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_085031.3 Gene:Rab27b / 80718 MGIID:1931295 Length:218 Species:Mus musculus


Alignment Length:202 Identity:88/202 - (43%)
Similarity:135/202 - (66%) Gaps:18/202 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNK----------KIKL 59
            ||||.|||.:||||||||..|:|::::.||..||:|:||||:.:.:..|.:          |:.|
Mouse     6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 70

  Fly    60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENA---SADVEKMLLGN 121
            |:||||||||||::|||::|.|||.:|::|:|.::||.|::||:..::.||   :.|:  :|:||
Mouse    71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI--VLIGN 133

  Fly   122 KCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPP--- 183
            |.:|.|:|:|::.:..:||.:|||.:.||||....|||::..||...|..:.||.:|....|   
Mouse   134 KADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKRMEKCVEKTQVPDTV 198

  Fly   184 KGGHQLK 190
            .||:..|
Mouse   199 NGGNSGK 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 80/178 (45%)
Rab27bNP_085031.3 Rab27A 6..185 CDD:206700 81/180 (45%)
Effector region. /evidence=ECO:0000250 38..46 5/7 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..218 4/12 (33%)

Return to query results.
Submit another query.