DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab3b

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_076026.1 Gene:Rab3b / 69908 MGIID:1917158 Length:219 Species:Mus musculus


Alignment Length:178 Identity:88/178 - (49%)
Similarity:127/178 - (71%) Gaps:0/178 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
            :.:||:||||:||:|.||||..|||:::|.|...|:||:|||||::|:....|::||||||||||
Mouse    17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQ 81

  Fly    68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
            ||:|||||||||||||.:|:||||.|:||..:::|...|:..:..:.:.:|:||||::.::|.|.
Mouse    82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVP 146

  Fly   133 KERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEAN 180
            .|:|..||.:.|..|.|.|||.:|:|.:||..|...|..|....|:.:
Mouse   147 TEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTD 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 86/165 (52%)
Rab3bNP_076026.1 Rab3 22..186 CDD:206657 84/163 (52%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20337 45..58 6/12 (50%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20337 78..96 16/17 (94%)

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