DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and rab13

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001025679.1 Gene:rab13 / 595071 XenbaseID:XB-GENE-6070728 Length:201 Species:Xenopus tropicalis


Alignment Length:207 Identity:138/207 - (66%)
Similarity:171/207 - (82%) Gaps:6/207 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            |||.||:||||||||||||||||::.|||||:||:|:||||||||||||.|::.||||||:||||
 Frog     1 MAKAYDHLFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            |||||:|||||||||||||:||||||.|:|:|||:||:::|:|||:|.||:|||||||::.:||:
 Frog    66 GQERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENAAAGVERMLLGNKCDMENKRK 130

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDSR 195
            |.|||||:||.|:||:|.|||||:|.||:|||.|||.||..|..||    :.|.....|....|.
 Frog   131 VPKERGEKLAKEHGIRFFETSAKSSQNVDEAFNTLARDILMKISKR----SAPGVKDPLDLKSSS 191

  Fly   196 TKDSWLSRCSLL 207
            .|.|  ::||:|
 Frog   192 KKGS--NKCSVL 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 123/165 (75%)
rab13NP_001025679.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 123/165 (75%)

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