Protein Alignment Rab8 and rab5d

DIOPT Version :10

• Sequence 1: NP_524172.1
• Gene: Rab8 / 40168
• FlyBaseID: FBgn0262518
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_001025576.1
• Gene: rab5d / 594964
• XenbaseID: XB-GENE-489496
• Length: 213
• Species: Xenopus tropicalis
• Alignment Length: 174
• Identity: 70/174 - (40%)
• Similarity: 110/174 - (63%)
• Gaps: 5/174 - (2%)

  Fly     9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTI 73
            |||:|:||..|||:.::.||.:..|:....:|||..|..:::.||:..:|.:|||||||||:.::
 Frog    20 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSL 84

  Fly    74 TTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQ 138
            ...|||||...::|:|||:.::|:..|.|::.::..||.::...|.|||.:|.:||.|..|..:.
 Frog    85 APMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKRMVEYEEAQA 149

  Fly   139 LAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNP 182
            .|.:.|:.|||||||.::||.|.||.:     ||...:.:|.||
 Frog   150 YAEDTGLLFMETSAKTAMNVNELFLAI-----AKKMPKSDAQNP 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab8	NP_524172.1	Rab8_Rab10_Rab13_like	6..172	CDD:206659	65/162 (40%)
rab5d	NP_001025576.1	Rab5_related	19..181	CDD:206653	67/165 (41%)