DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and rab25b

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001025142.1 Gene:rab25b / 574424 ZFINID:ZDB-GENE-050706-113 Length:210 Species:Danio rerio


Alignment Length:174 Identity:76/174 - (43%)
Similarity:121/174 - (69%) Gaps:0/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
            :.|:::||::|||:|||||:.:|.||:::.|:....:|||::|..||::|:...||.|||||||.
Zfish     5 EAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQIWDTAGL 69

  Fly    68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
            ||:|.||:||||||:|.:|||||::..::|:.:.|::.:.::|...:..||:|||.:|...|.|.
Zfish    70 ERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNKSDLAAVRSVP 134

  Fly   133 KERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKR 176
            .|..:..|.:.|:.|.||||..|:|||.||.|:.::|..|...:
Zfish   135 TEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 74/165 (45%)
rab25bNP_001025142.1 Rab11_like 9..172 CDD:206660 73/162 (45%)

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