DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and rasef2

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001082896.1 Gene:rasef2 / 572256 ZFINID:ZDB-GENE-070424-92 Length:663 Species:Danio rerio


Alignment Length:204 Identity:82/204 - (40%)
Similarity:121/204 - (59%) Gaps:17/204 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRT 72
            :::|:|.||:|.||:..|.|.|.:.|.....:|:|:||:|:.:.:|.:|..|||||||||||||:
Zfish   467 VYRLVLAGDAGSGKSSFLLRLSLNEFRGDIQTTLGVDFQIKKMLVDGEKTNLQIWDTAGQERFRS 531

  Fly    73 ITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ----VSK 133
            |..:|:|.|.|::|:||:|.|.||.|::.|:..|.|:...|:...::|||.:|...|.    ||.
Zfish   532 IARSYFRKAHGVLLLYDVTSESSFLNVREWVEQIRESTDEDIPMCIIGNKVDLRAARPEGSCVSS 596

  Fly   134 ERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIK--AKTEKRMEANNPPKGGHQLK-PMDSR 195
            ..||:||:.|...|.|.|||...:|.||.|.||.::|  .|..:|.|:        |:| .:..|
Zfish   597 IHGEKLAMNYNALFCEASAKEGTSVIEAVLHLAREVKKHVKLGRRSES--------QVKLSLHKR 653

  Fly   196 TKDSWLSRC 204
            .|.  ||.|
Zfish   654 RKT--LSNC 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 72/169 (43%)
rasef2NP_001082896.1 FRQ1 <3..66 CDD:444056
CCDC158 <94..>355 CDD:464943
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 324..343
Rab 468..630 CDD:206640 70/161 (43%)
Blue background indicates that the domain is not in the aligned region.

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