DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and cracr2ab

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_009298523.1 Gene:cracr2ab / 564347 ZFINID:ZDB-GENE-041210-94 Length:773 Species:Danio rerio


Alignment Length:183 Identity:74/183 - (40%)
Similarity:117/183 - (63%) Gaps:1/183 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRT 72
            |||::|:|:|.||||.:|.||.:..|::...:|:|||:.:||:.|.:..:.||:||||||||:|:
Zfish   586 LFKVILVGNSSVGKTALLRRFCDGQFHSATSATVGIDYSVRTLNLGDSHVALQLWDTAGQERYRS 650

  Fly    73 ITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGE 137
            ||..::|.|.|::::||||.|.||.:::.|:.:|:|.....:..||||||.:..::|:|..:..:
Zfish   651 ITKQFFRKADGVVVIYDITMEDSFSSVRPWLSSIQEAVGDPIPVMLLGNKSDKENEREVQTKEAD 715

  Fly   138 QLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLK 190
            .||.|..:.|.|.||....||.||.:.||..:: :.|.|:..|....|...||
Zfish   716 LLAEEANLMFYECSAYTGANVLEAMIHLARVLR-EQEDRVWVNTVRLGDQPLK 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 68/163 (42%)
cracr2abXP_009298523.1 FRQ1 <42..108 CDD:444056
Smc <171..>378 CDD:440809
Rab 587..745 CDD:206640 66/157 (42%)
Blue background indicates that the domain is not in the aligned region.

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