DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab6

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_061510386.1 Gene:Rab6 / 4577653 VectorBaseID:AGAMI1_003514 Length:285 Species:Anopheles gambiae


Alignment Length:188 Identity:83/188 - (44%)
Similarity:121/188 - (64%) Gaps:8/188 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTI 73
            |||:.:|:..||||.::.||..|:|:.|:.:||||||..:|:.|:::.::||:||||||||||::
Mosquito    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly    74 TTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQ 138
            ..:|.|.:...::|||||...||.....||.::.....:||..||:|||.:|:||||||.|.||:
Mosquito    79 IPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 143

  Fly   139 LAIEYGIKFMETSAKASINVEEAFLTLASDIKA--KTEKRMEANNPPKGGHQL-KPMD 193
            .|.|..:.|:||||||..||::.|..:|:.:..  .||     |.||:....| ||.|
Mosquito   144 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTE-----NKPPEDSILLAKPND 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 74/164 (45%)
Rab6XP_061510386.1 None

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