DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab23

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster


Alignment Length:179 Identity:64/179 - (35%)
Similarity:103/179 - (57%) Gaps:5/179 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTIT 74
            |::::|:.||||:.::.|:.:..|...:..|||:||..|.||:|.:.:::.:|||||||.|..||
  Fly    39 KVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDTAGQEEFDCIT 103

  Fly    75 TAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQL 139
            .||||||...:||:..|...||:.||:|.|.: ||...::..:::.||.:|.::..|:.:..|.|
  Fly   104 KAYYRGAQASVLVFSTTDRASFDAIKDWKRKV-ENECNEIPTVIVQNKIDLIEQAVVTADEVETL 167

  Fly   140 AIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQ 188
            |.....:.:.||.|..|||...|..||:    |..:.|..:.....|:|
  Fly   168 AKLLNCRLIRTSVKEDINVASVFRYLAT----KCHQLMTQSYDQVAGNQ 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 60/161 (37%)
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 55/151 (36%)

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