DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RAB44

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_054211399.1 Gene:RAB44 / 401258 HGNCID:21068 Length:1027 Species:Homo sapiens


Alignment Length:89 Identity:25/89 - (28%)
Similarity:33/89 - (37%) Gaps:17/89 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 MAGGVGLSIGNLATQYSLAFVGLSVTEVTAASITVVVGTTVNYFLDNGLNRADILFSGVGCFMVA 90
            |||...|.:.||||          :....||:.|....|..|. |.:..:....|.|.|......
Human   290 MAGMNALQLQNLAT----------LAAAAAAAQTSATSTNANP-LSSTSSALGALTSPVAASTPN 343

  Fly    91 VCLGSAVHSSNSADIKAKLGKLSG 114
            ...|:|::|..|      ||.|.|
Human   344 STAGAAMNSLTS------LGTLQG 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 25/89 (28%)
RAB44XP_054211399.1 FRQ1 <44..110 CDD:444056
COG4372 191..>339 CDD:443500 17/59 (29%)
PHA03247 <326..653 CDD:223021 11/42 (26%)
PRK07764 <529..837 CDD:236090
Rab 840..998 CDD:206640
Blue background indicates that the domain is not in the aligned region.

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