DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Cracr2a

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_006506404.1 Gene:Cracr2a / 381812 MGIID:2685919 Length:751 Species:Mus musculus


Alignment Length:171 Identity:70/171 - (40%)
Similarity:113/171 - (66%) Gaps:0/171 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQE 68
            |.|.|||::.:|||.||||..|.|..|..|:....:|:|||::::|:.:||.::.||:|||||||
Mouse   561 TPDRLFKIVFVGDSAVGKTSFLRRLCEARFSPGMAATVGIDYRVKTVTVDNAQVALQLWDTAGQE 625

  Fly    69 RFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSK 133
            |:|.|:..::|.|.|:.::||:|.::||.:|:.|:.::||.....:..:|||||.:...:|:|.:
Mouse   626 RYRCISQQFFRKADGVAVMYDLTAKQSFLSIRQWLSSVEEAVGDRIPVLLLGNKLDNEKEREVPR 690

  Fly   134 ERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTE 174
            ..|||||.|..:.|.|.||.:..|.:|:.|.||..:|.:.:
Mouse   691 GLGEQLAKENNLIFYECSACSGHNAQESLLHLARLLKEQED 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 69/165 (42%)
Cracr2aXP_006506404.1 FRQ1 <73..137 CDD:444056
FRQ1 110..>187 CDD:444056
Smc <183..>427 CDD:440809
Rab 566..724 CDD:206640 65/157 (41%)
Blue background indicates that the domain is not in the aligned region.

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