DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab2

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster


Alignment Length:192 Identity:90/192 - (46%)
Similarity:134/192 - (69%) Gaps:4/192 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQE 68
            :|.||||.::|||:||||:|:|.:|::..|......|||::|..|.|.:|.|:||||||||||||
  Fly     2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66

  Fly    69 RFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSK 133
            .||:||.:|||||.|.:||||||:.::|.::..|:.:..:::::::..||:|||.:|..:|:|.|
  Fly    67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKK 131

  Fly   134 ERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRM-EANNPPKG---GHQLKP 191
            |.||..|.|:|:.||||||:.:.||||||:..|.:|..|.::.: :.||...|   |.|..|
  Fly   132 EEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSP 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 82/165 (50%)
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 90/192 (47%)

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