DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab9b

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_795945.1 Gene:Rab9b / 319642 MGIID:2442454 Length:201 Species:Mus musculus


Alignment Length:178 Identity:69/178 - (38%)
Similarity:108/178 - (60%) Gaps:11/178 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRT 72
            |.|::|:||.||||:.::.|:..:.|::....|||::|..|.:|:|.:.:.||||||||||||::
Mouse     7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKS 71

  Fly    73 ITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEK------MLLGNKCELTDKRQV 131
            :.|.:||||...:|.:.:...:||||:.||.:  |....|||:.      ::||||.:..| |||
Mouse    72 LRTPFYRGADCCLLTFSVDDRQSFENLGNWQK--EFIYYADVKDPDHFPFVVLGNKVDKED-RQV 133

  Fly   132 SKERGEQLAIEYG-IKFMETSAKASINVEEAFLTLASDIKAKTEKRME 178
            :.|..:...:|.| ..::|||||...||..||......:.| .|:::|
Mouse   134 TTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLA-VEEQLE 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 66/170 (39%)
Rab9bNP_795945.1 Rab9 3..172 CDD:206697 66/167 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P51151 31..42 3/10 (30%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P51151 64..78 7/13 (54%)

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