DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab12

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_037149.1 Gene:Rab12 / 25530 RGDID:3527 Length:243 Species:Rattus norvegicus


Alignment Length:168 Identity:83/168 - (49%)
Similarity:125/168 - (74%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERF 70
            |:..::::||..|||||.::.||::|.|.....||:|:||||:|:||..|||:||||||||||||
  Rat    39 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERF 103

  Fly    71 RTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKER 135
            .:||:||||.|.||:||||||::::|:::..|::.|::.||.|.|.:|:|||.:....|::|:::
  Rat   104 NSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREISRQQ 168

  Fly   136 GEQLAIEY-GIKFMETSAKASINVEEAFLTLASDIKAK 172
            ||:.|.:. |::|.|.|||.:.||:|.||.|..||..|
  Rat   169 GEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 82/166 (49%)
Rab12NP_037149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
Rab12 42..243 CDD:206699 82/165 (50%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 64..78 5/13 (38%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 96..113 13/16 (81%)
Blue background indicates that the domain is not in the aligned region.

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