DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and rab2a

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_958862.1 Gene:rab2a / 140617 ZFINID:ZDB-GENE-011212-2 Length:212 Species:Danio rerio


Alignment Length:195 Identity:89/195 - (45%)
Similarity:133/195 - (68%) Gaps:0/195 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQER 69
            |.||||.::|||:||||:|:|.:|::..|......|||::|..|.|.:|.|:||||||||||||.
Zfish     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKE 134
            ||:||.:|||||.|.:||||||:..:|.::..|:.:..:::::::..||:|||.:|..:|:|.||
Zfish    68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKE 132

  Fly   135 RGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDSRTKDS 199
            .||..|.|:|:.|||||||.:.||||||:..|.:|..|.::.:...|....|.::.|..:.|..:
Zfish   133 EGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNST 197

  Fly   200  199
            Zfish   198  197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 83/165 (50%)
rab2aNP_958862.1 PLN03108 1..188 CDD:178655 87/184 (47%)

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