DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab8 and RAB10

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_057215.3 Gene:RAB10 / 10890 HGNCID:9759 Length:200 Species:Homo sapiens


Alignment Length:205 Identity:141/205 - (68%)
Similarity:162/205 - (79%) Gaps:12/205 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
            ||||.||||||||||||||||:|||||:|||||||||||||||||:|:||..|||||||||||||
Human     4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68

  Fly    68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
            |||.||||:|||||||||||||||..||||||..|:|||:|:|:.|||:|||||||::.|||.|.
Human    69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVP 133

  Fly   133 KERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKT---EKRMEANNPPKGGHQLKPMDS 194
            |.:|||:|.|:||:|.||||||:||:|:||||||.||..||   |...|..:...||        
Human   134 KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSGG-------- 190

  Fly   195 RTKDSWLSRC 204
             ....|.|:|
Human   191 -GVTGWKSKC 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 129/165 (78%)
RAB10NP_057215.3 Rab8_Rab10_Rab13_like 7..173 CDD:206659 129/165 (78%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 13/13 (100%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 14/16 (88%)

Return to query results.
Submit another query.