DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and rab8b

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001090677.1 Gene:rab8b / 100036650 XenbaseID:XB-GENE-480278 Length:207 Species:Xenopus tropicalis


Alignment Length:207 Identity:162/207 - (78%)
Similarity:182/207 - (87%) Gaps:0/207 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            |||||||||||||||||||||||:|||||||||||||||||||||||||||||.|||||||||||
 Frog     1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            ||||||||||||||||||||||||||.||||:|||||||||||:||:|||:|:|||||::.||||
 Frog    66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQ 130

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDSR 195
            ||:|:||:|||:|||||:|||||:||||||||.|||.||..|..::|..:..|.||..:|..:..
 Frog   131 VSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRKMNESISPGGGGPVKITEKS 195

  Fly   196 TKDSWLSRCSLL 207
            :|.|...||.||
 Frog   196 SKKSSFFRCVLL 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 145/165 (88%)
rab8bNP_001090677.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 145/165 (88%)

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