DRSC/TRiP Functional Genomics Resources

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Protein Alignment Papss and cysC

DIOPT Version :10

Sequence 1:NP_730460.1 Gene:Papss / 40167 FlyBaseID:FBgn0020389 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_417230.1 Gene:cysC / 947221 ECOCYCID:EG10185 Length:201 Species:Escherichia coli


Alignment Length:200 Identity:95/200 - (47%)
Similarity:126/200 - (63%) Gaps:7/200 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NVTEQKHHVTRETRGKNLGLCRGFRGCTVWLTGLSGAGKTSIAFELEAYLVSRGIPAYGLDGDNI 113
            ||....|.||.:.|    .|..|.||..:|.|||||:||:::|..||..|...|:..|.|||||:
E. coli     7 NVVWHSHPVTVQQR----ELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNV 67

  Fly   114 RTGLNKNLGFTPADREENIRRVGEVAKLFADSGVVAICSFVSPFADDREMARKIHKDAGLKFYEI 178
            |.||..:|||:.|||:||||||||||.|..::|:|.:.:|:||...:|:|.|:...:.  :|.|:
E. coli    68 RHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEG--RFIEV 130

  Fly   179 FVDTPLDVCETRDVKGLYKKAREGVIKGFTGITQEYERPQMPELVVNTHGYTVRESTQKLVTLLE 243
            ||||||.:||.||.||||||||.|.::.||||...||.|:..|:.:|.. ..|....|:|:.||.
E. coli   131 FVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGE-QLVTNLVQQLLDLLR 194

  Fly   244 QEGII 248
            |..||
E. coli   195 QNDII 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PapssNP_730460.1 CysC 55..249 CDD:440295 92/193 (48%)
ATPS 279..650 CDD:173895
cysCNP_417230.1 PRK03846 5..201 CDD:179661 94/199 (47%)
Blue background indicates that the domain is not in the aligned region.

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