DRSC/TRiP Functional Genomics Resources

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Protein Alignment Deaf1 and gmeb2

DIOPT Version :10

Sequence 1:NP_524169.1 Gene:Deaf1 / 40164 FlyBaseID:FBgn0013799 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_009295385.1 Gene:gmeb2 / 568906 ZFINID:ZDB-GENE-090313-149 Length:501 Species:Danio rerio


Alignment Length:290 Identity:57/290 - (19%)
Similarity:116/290 - (40%) Gaps:59/290 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 SENPSTQHNEVFQIRCKTTCAELYRSKLGSGGRG-RCVKYKDKWHTPSEFEHVCGRGSSKDWKRS 273
            |::...:.:.::.|.|..:.|.|...|....|.. :||:..:...:|.||.::.|:.:.|||||:
Zfish    75 SDDTDVEGDILYPITCGDSKANLVWKKFVCPGINIKCVQLNEHLISPKEFVYIAGKSTLKDWKRA 139

  Fly   274 IKYGGKSLQSLIDEGTLT--PHATNCSCTVCCDDEAGESASGPVRLFTPYKRRKRNQTDLDM--- 333
            |:..|..|:.::|.|.|.  .|:..||.|  |                       ..|.:|:   
Zfish   140 IRLNGTMLRKIMDSGELDFYQHSRLCSNT--C-----------------------RSTKIDLVGS 179

  Fly   334 ESGPKRKRNTHHSNNNNSNTNNNNTSGSGANNCVDVTAAVAAATASVVDENNMFLSEENITSKDE 398
            ......:::|..:....::|:.|.:|.|.:.:..|.|..|.|            :.|:.:|.   
Zfish   180 RGSLSSQQSTETAPATPASTDVNGSSSSFSTDVEDSTEWVTA------------IGEDTMTF--- 229

  Fly   399 PWAALNDS---LDTSTELVDQSQ--MGNTYER-ETFVVNINDGSSIAVLDTSQSMKNIEHVYCTM 457
             |..|.|:   .|...:|..:.|  :....|| :...:.:.|.:.:..:..:..|.::      :
Zfish   230 -WRGLKDAGMLEDVMEDLQKEIQEILKGLEERIQDPPLQVKDAALLNNIVQNFGMLDL------V 287

  Fly   458 VKATNDFKRMLNDMKQSFERRIEVLQKERD 487
            .|.....|..::..::.:.|.:..|:::.|
Zfish   288 KKVLASHKSQMDRCREQYTRSLVALEQQCD 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Deaf1NP_524169.1 SAND 219..291 CDD:128554 22/72 (31%)
zf-MYND 521..557 CDD:460312
gmeb2XP_009295385.1 SAND 84..157 CDD:128554 22/72 (31%)
Blue background indicates that the domain is not in the aligned region.

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