DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Deaf1 and Deaf1

DIOPT Version :10

Sequence 1:NP_524169.1 Gene:Deaf1 / 40164 FlyBaseID:FBgn0013799 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_058570.1 Gene:Deaf1 / 54006 MGIID:1858496 Length:566 Species:Mus musculus


Alignment Length:605 Identity:165/605 - (27%)
Similarity:254/605 - (41%) Gaps:139/605 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AALAEDVVKEEVILESSSHHHHHHHHQLDTKVRMVTSSSNDNSGSGGASGGT-------SGAGGG 75
            ||.|.:...||.:|............:.:.:.|.||:.:...:.||....||       ..|...
Mouse    29 AAAAAESEAEEPVLSRDEDSEEDADSEAERETRRVTAVAVMAAESGHMDMGTEALPSPDEAAAAA 93

  Fly    76 NGGGGVVSVPVSLPIGSMITGTTFNVITPDQLPPHFKPMLCVDNNGYLSGSTVS------MGNDL 134
            .....|.:|.|: .:||    :..||.|..           |.|...:||..:|      :|:.|
Mouse    94 AAFAEVTTVTVA-NVGS----SADNVFTTS-----------VANAASISGHVLSGRTALQIGDSL 142

  Fly   135 KT-----IVIQQQQTQPGGGGGGANNAGTNTTATNTIGLNHDGS----GSNNSHDSLATLEHAAG 190
            .|     ||:.                 |:.:...|.||....:    |..:....||.      
Mouse   143 NTEKATLIVVH-----------------TDGSIVETTGLKGPAAPLTPGPQSPPTPLAP------ 184

  Fly   191 GASGVGGGGGGTGGGSSGWSENPSTQHNEVFQIRCKTTCAELYRSKLGSGGRGRCVKYKDKWHTP 255
                    |...||....|  :||...:|: .:||:.....||:|:|||||||||:|..:.|::|
Mouse   185 --------GQEKGGTKYNW--DPSVYDSEL-PVRCRNISGTLYKSRLGSGGRGRCIKQGENWYSP 238

  Fly   256 SEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDEGTLTPHATNCSCTVCCDDEAGESASGPVRLFTP 320
            :|||.:.||.|||||||||:|.|:.||.||.:|.|.|||.:|:|..||||   .:.|||||||.|
Mouse   239 TEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDD---MTLSGPVRLFVP 300

  Fly   321 YKRRKRNQTDLDMESGPKRKRNTHH-------SNNNNSNTNNNNTSGSGA-----NNCVDVTAAV 373
            |||||:..   ::.:.|.:|.:..:       :....:.|.:...:.|||     .:.|:.||.:
Mouse   301 YKRRKKEN---ELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVEATAVI 362

  Fly   374 AAATASVVDENNMF----LSEENI-----TSKDEP-WAALNDS----------LDTSTELVDQSQ 418
            :.:.|    :.::|    :.|..:     ....|| :....||          |.||...:..:.
Mouse   363 SESPA----QGDVFAGATVQEAGVQPPCRVGHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVLTS 423

  Fly   419 MGNTYERETFVVNINDGSSIAVLDTSQ--SMKNIEHVYCTMVKATNDFKRMLNDMKQSFERRIEV 481
            :.......:........:.::.|:.|:  |...:|.:..:::......|.:....||:       
Mouse   424 LPALAVPPSTPTKAVSPTVVSGLEMSEHRSWLYLEEMVNSLLNTAQQLKTLFEQAKQA------- 481

  Fly   482 LQKERDAAVSAMRVQVHADIDDPNISGSLHGNEIISAKKCANCNREALAECSLCRKTPYCSEFCQ 546
             ...|:|||:..|:||..:..:               :.|.||.|||::||:.|.|..|||.|||
Mouse   482 -SSCREAAVTQARMQVDTERKE---------------QSCVNCGREAMSECTGCHKVNYCSTFCQ 530

  Fly   547 RKDWNAHQVECTRNPQTTTQ 566
            ||||..||..|.::...|.|
Mouse   531 RKDWKDHQHVCGQSASVTVQ 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Deaf1NP_524169.1 SAND 219..291 CDD:128554 39/71 (55%)
zf-MYND 521..557 CDD:460312 22/35 (63%)
Deaf1NP_058570.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..62 3/28 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..191 5/31 (16%)
SAND 202..274 CDD:128554 27/71 (38%)
Nuclear localization signal. /evidence=ECO:0000255 300..306 3/5 (60%)
Interaction with LMO4 404..479 12/92 (13%)
zf-MYND 505..541 CDD:460312 9/35 (26%)

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