DRSC/TRiP Functional Genomics Resources

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Protein Alignment Deaf1 and Gmeb2

DIOPT Version :10

Sequence 1:NP_524169.1 Gene:Deaf1 / 40164 FlyBaseID:FBgn0013799 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_937812.1 Gene:Gmeb2 / 229004 MGIID:2652836 Length:530 Species:Mus musculus


Alignment Length:387 Identity:77/387 - (19%)
Similarity:142/387 - (36%) Gaps:102/387 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 KTIVIQQQQTQPGGGGGGANNAGTNTTATNTIGLNHDGSGSNNSHDSLATLEHAAGGASGVGGGG 199
            :.:|:....|...|       :|.....|..:..|....|.:.:.|::.| |:||..|:.     
Mouse    12 EVVVVTTPDTAVDG-------SGVEEVKTVLVTTNLAPHGGDLTEDNMET-ENAAAAAAA----- 63

  Fly   200 GGTGGGSSGWSENPSTQHNE-----------------VFQIRCKTTCAEL-YRSKLGSGGRGRCV 246
                      :...|:|..|                 |:.|.|..:.|.| :|..:..|...:||
Mouse    64 ----------AFTASSQLKEAVLVKMAEEGENLEAEIVYPITCGDSRANLIWRKFVCPGINVKCV 118

  Fly   247 KYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDEGTLTPHATNCSCTVCCDDEAGESA 311
            :|.:...:|.||.|:.|:.:.|||||:|:..|..|:.::|.|.|..:..:..|:..|.....:.:
Mouse   119 QYDEHVISPKEFVHLAGKSTLKDWKRAIRMNGIMLRKIMDSGELDFYQHDKVCSNTCRSTKIDLS 183

  Fly   312 SGPVRLFTPYKRRKRNQTDLDMESGPKRKRNTHHSNNNNSNTNNNNTSGSGANNCVDVTAAVAAA 376
            ...|.|.:|                    .:|.:.....:..:.|   ||.|...::........
Mouse   184 GARVSLSSP--------------------TSTEYIPLTPAAADVN---GSPATITIETCEDPGDW 225

  Fly   377 TASVVDENNMFLSEENITSKDEPWAALNDS--LDTSTELVD--QSQMGNTYE------------- 424
            |.::.|:...|            |..|.|:  ||   |::.  |.::..|.:             
Mouse   226 TTTIGDDTFAF------------WRGLKDAGLLD---EVIQEFQQELEETMKGLQQRVQDPPLQL 275

  Fly   425 RETFVVNINDGSSIAVLDTSQSMKNIEHVYCTMVKATNDFKRMLNDMKQSFE---RRIEVLQ 483
            |:..::| |...:..:||..:  |.:....|.|.::...:.|.|..::|..:   ||.:.|:
Mouse   276 RDAVLLN-NIVQNFGMLDLVK--KVLASHKCQMDRSREQYARDLAALEQQCDEHRRRAKELK 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Deaf1NP_524169.1 SAND 219..291 CDD:128554 26/89 (29%)
zf-MYND 521..557 CDD:460312
Gmeb2NP_937812.1 SAND 90..163 CDD:128554 25/72 (35%)
Blue background indicates that the domain is not in the aligned region.

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