DRSC/TRiP Functional Genomics Resources

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Protein Alignment Deaf1 and Samd11

DIOPT Version :10

Sequence 1:NP_524169.1 Gene:Deaf1 / 40164 FlyBaseID:FBgn0013799 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001402910.1 Gene:Samd11 / 102549710 RGDID:1310271 Length:844 Species:Rattus norvegicus


Alignment Length:199 Identity:59/199 - (29%)
Similarity:91/199 - (45%) Gaps:47/199 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 QIRCKTTCAELYRSKLGSGGRGRCVKYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLID 286
            ::.|....|.||..||..|.:|..::::.:|.||:||:.|.||.::|||||||::.||||::|:.
  Rat   117 EVECGDNRALLYVRKLCQGSKGPSIRHRGEWLTPNEFQFVSGRETAKDWKRSIRHKGKSLKTLMS 181

  Fly   287 EGTLTPHATNCSCTVCCDDEAGESASGPV---RL-------FTPYKRRKRNQT------DLDME- 334
            :|.|..|...|.|..|       ..|.||   ||       ..|....|:.:|      |.|.: 
  Rat   182 KGILRVHPPICDCPGC-------RISSPVNRGRLADKRTVTLPPTHALKKERTPSFSASDGDSDG 239

  Fly   335 SGP-------------------KRKRNTHHSNNNNSNTNNNNTSGSGANNCVDVTAAVAAATASV 380
            |||                   ||:.:||.    :.|.:...||.|..|:...:.::|..:...|
  Rat   240 SGPACGQQLSLKQEDDPHFHIMKRRVHTHW----DVNISFRETSCSQDNDLPTLISSVHRSRCLV 300

  Fly   381 VDEN 384
            :.|:
  Rat   301 MPEH 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Deaf1NP_524169.1 SAND 219..291 CDD:128554 29/68 (43%)
zf-MYND 521..557 CDD:460312
Samd11NP_001402910.1 SAND 110..185 CDD:460167 29/67 (43%)
SAM_Samd7,11 704..771 CDD:188978
Blue background indicates that the domain is not in the aligned region.

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